Gene Aave_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0279 
Symbol 
ID4669751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp310569 
End bp311534 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content75% 
IMG OID639821485 
Producthypothetical protein 
Protein accessionYP_968660 
Protein GI120608982 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCC CATCGCAAGC AGCCTCTCCC GACACGCCGT CTTCCGCCAC CATCCGGCTG 
GCGGCACAGC CCGCCTCCCG GGCGCCGCTG GGCATCGGCA TGGTGCTGCT GGCCGCCGTG
TTGTGGGGCA CGACGGGCAC GGCGCAGAGC CTCGCGCCTT CCGGCCTGGC GCCGGTGTGG
GTGGGGGCGC TGCGGCTGCT GATCGCCGGT GCTTTCTTCG CGGCGCTGCT GCGGTGGCAG
GGCGGTGCGC GCGGCCTCGG CGCGCTGCCC TGGCGCGGCG TCCTGGCCGG CGGGGTCTGC
GTGGCCGCCT ACAACCTGAG TTTTTTCGCC GGGGTGAAGG CCAGCGGCGT GGCGCTGGGC
ACGGCGATCG CGATCGGCAG CGGCCCGATC TGGGCCGGGC TGCTGCAGAC CGTGGTGCAG
CGCCGCTGGC CCGCGGCCGT GTGGTGGGCG GGCACGCTGC TCGGCGTGGC GGGCGGGGCC
GCCATGGCGC TGGACGGCCG CACCAGCGTG CAGGCGCCGC CGGGCGGCAT CGCGCTGTGC
CTGGTGGCGG GCCTGTCGTA CGCTGCCTAT GCGCTCGTCA ACCAGCGGCT GGTGGCCCGC
GCAGCGCCGG GGGCCGTCAA CCTGGCGGTG TTCGGCTCGG CCGCGCTGTT GTCCCTGCCG
GCCGCCTTCG CCATCGCCGG GCCGCTCGCG GTGTCGGCGC GCGCCTGGGG GGTCGTGCTG
TACCTGGGTC TGGTGGCCAC CGGAGTGGCA TACCTGCTTT TCACGCATGC GCTGAGGCAC
ATCAGCGGCG CCACGGGCGT CACCCTCGCG CTGGCCGAAC CGGTCGTCGC GTTCTGCCTG
GCCGTGGCGG TGGTAGGGGA ATCGCCGTCC GCCATGGCCG TTTGGGGGCT GGCGGGCGTG
ATCGGCGGGC TGCTGATCGT GGTCTGGTCG GAGATCCGCG GCCGCAGGGG GGCAGCGGCC
GGGTGA
 
Protein sequence
MSSPSQAASP DTPSSATIRL AAQPASRAPL GIGMVLLAAV LWGTTGTAQS LAPSGLAPVW 
VGALRLLIAG AFFAALLRWQ GGARGLGALP WRGVLAGGVC VAAYNLSFFA GVKASGVALG
TAIAIGSGPI WAGLLQTVVQ RRWPAAVWWA GTLLGVAGGA AMALDGRTSV QAPPGGIALC
LVAGLSYAAY ALVNQRLVAR AAPGAVNLAV FGSAALLSLP AAFAIAGPLA VSARAWGVVL
YLGLVATGVA YLLFTHALRH ISGATGVTLA LAEPVVAFCL AVAVVGESPS AMAVWGLAGV
IGGLLIVVWS EIRGRRGAAA G