Gene Aave_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0152 
Symbol 
ID4665321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp166877 
End bp168004 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content69% 
IMG OID639821363 
ProductL-threonine synthase 
Protein accessionYP_968538 
Protein GI120608860 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000998245 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACTT CGCTCTACAT CGACCCGGCC AGCGGCCGGA CCTACCCCCT GGACGTGCCG 
CGGTGGTGCT CCGACGACCG CAAGCCGCTG CTGGTCACGC CGCAGCCCGG CATGTCGCGC
GACGACATCG ACCGCACGTG CCGCTCCCAG TGGCGCTACC GGGCATCGCT GCCGCTGGAT
GTCGCGCGCC CGATCTCCAT GGGCGAGGGC TGCACGCCCC TCGTGCAGAA GGAATGGGGT
GCCCACCGGC CATATTTCAA GCTCGAATGG TTCCACCCGA CCGGCAGCTT CAAGGACCGC
GGCACCACGG TGATGCTCTC CGTGCTGCGC CAGCAGGGCG TCGATGCGGT GCTGGAGGAC
AGCTCGGGCA ACGGGGGTGC GTCGGTGTCC GCGTACGGTG CCGCGGGCGG CATGCGGGTG
AAGATCCTCG CGCCGGCCTA TGCCTCGAAG CCGAAGATCG CGCAAATGCG TGCCTACGGG
GCGGAAGTGC AGCTGGTCGA TGGGCCGCGC CAGGCCTGCG AGGACGAGGC GGTGCGGCAA
TCGGCCCACA TCTTCTATTC GAGCCACAAC TGGCAGCCCT TCTTCCTCGA AGGCACGAAG
GCGATCGGCT ACGAAATCTG GGAAGACCTG AATTTCCGCG CGCCGGACAA CATCGTCATG
CCCGCCGGGG CCGGCAGCAA CGTGCTGGGG TGCTTCATGG CGTTTTCCGA GCTGCTGCGC
GCGGGCCAGA TCGCGAAGAT GCCGCGCCTG TTCGTCTGCC AGCCGCTGAA CTGCTCGCCG
ATCGACGCGA GCTTCCAGGC GGGCGTGACG ACCCCGGTGG CGCGCGAGGT GCGCAAGACG
GTGGCCGAGG GAACGGCGAT TGCGCACCCC CTGCGGCTGC GGGAGCTCGT CTCGGCGGTG
CAGGTCACCG GCGGCGCCAC CGTGGCGCTG CAGGAGCAGG CCATCGTCGA TGCGTTCAGG
AAGGCGGCGC GCACGGGCCT GCTGCCCGAA CTCACGTCTG CCACGGCGAT CGCCGGGCTC
GATCACCTGA TCCAGGCCGG AACGGTCCAC GAGAGCGAGG AGACGGTGGT GATCCTGACG
GCCACCGGCA TCAAGAATGC CGATGCCATC GCGGAGATGT TCGCATGA
 
Protein sequence
MTTSLYIDPA SGRTYPLDVP RWCSDDRKPL LVTPQPGMSR DDIDRTCRSQ WRYRASLPLD 
VARPISMGEG CTPLVQKEWG AHRPYFKLEW FHPTGSFKDR GTTVMLSVLR QQGVDAVLED
SSGNGGASVS AYGAAGGMRV KILAPAYASK PKIAQMRAYG AEVQLVDGPR QACEDEAVRQ
SAHIFYSSHN WQPFFLEGTK AIGYEIWEDL NFRAPDNIVM PAGAGSNVLG CFMAFSELLR
AGQIAKMPRL FVCQPLNCSP IDASFQAGVT TPVAREVRKT VAEGTAIAHP LRLRELVSAV
QVTGGATVAL QEQAIVDAFR KAARTGLLPE LTSATAIAGL DHLIQAGTVH ESEETVVILT
ATGIKNADAI AEMFA