Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0041 |
Symbol | |
ID | 4666269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 47920 |
End bp | 48633 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639821257 |
Product | two component transcriptional regulator |
Protein accession | YP_968432 |
Protein GI | 120608754 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATTC TCGTAGTCGA AGACGATGCC GTGTTGCGCG GCGTGATGCA GCGCAGCCTG GCCGATGCGG GCCACCGCGT GGACGTGGCC GCCACGCTGG CCGAGGCCGA CCATTTCTGG AAGGTGCAGC CTTTCGATGC GGTGCTGCTG GACCTGAACC TGCCGCAGGA TGCCGCCCAT GCCAGCCCGG TGGGCAGCGG CCTGGCCGTG CTGCGCGCCG CCCGCGCGCG CGGTGACCGC ACGCCGGTGC TGGTGCTCAC CGCCCGCGAC CGCACCGAGG AGCGCATCGC CGGCCTGGAT GCGGGCGCCG ACGACTACCT GGGCAAGCCC TTCGATCTGG CCGAGGTGGA AGCCCGGCTG CGCGCCCTGG TGCGCCGCAC GCAGGGCACG GACGATCGCA CCAGCGCCGG CACGCTGGTG CTGGACCGGC GGGTGCGCCG CTTCACCCTG CATGGCCAGC CCTTCGACCT GCCTGCGCGC GAGTTCGAGG TGCTGTGGGA GCTGATGACC CCGCCCGGGC GGGTGGTGAG CAAGCGCAGC CTGTCGGACA AGCTGTCGGA CTTCGATGAC ATGCTGGGCG ACAACGCGCT GGAAGCCTTC ATCTCGCGCC TGCGCAAGAA GCTGCAGGGC AGCGGCGCCG GCATCCGCAC GCTGCGCGGG CTGGGCTACA TGCTGGAGGC GACCGACGCC TCCGCGACGC AAGGGGATGC ATGA
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Protein sequence | MRILVVEDDA VLRGVMQRSL ADAGHRVDVA ATLAEADHFW KVQPFDAVLL DLNLPQDAAH ASPVGSGLAV LRAARARGDR TPVLVLTARD RTEERIAGLD AGADDYLGKP FDLAEVEARL RALVRRTQGT DDRTSAGTLV LDRRVRRFTL HGQPFDLPAR EFEVLWELMT PPGRVVSKRS LSDKLSDFDD MLGDNALEAF ISRLRKKLQG SGAGIRTLRG LGYMLEATDA SATQGDA
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