Gene Aasi_0237 details

Gene Information

• Locus tag: Aasi_0237
• ID: 6376427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Amoebophilus asiaticus 5a2
• Kingdom: Bacteria
• Replicon accession: NC_010830
• Strand: +
• Start bp: 266562
• End bp: 268352
• Gene Length: 1791 bp
• Protein Length: 596 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 642681424
• Product: putative inner membrane protein translocase component YidC
• Protein accession: YP_001957409
• Protein GI: 189501692
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0706] Preprotein translocase subunit YidC
• TIGRFAM ID: [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain; [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATAAAA ATAAACTTAT CGGTCTAATA CTTATATCTA TCCTACTCAT TGTATATACG 
CATTTTTTTG ATAATAAATT ACCAAAGACA TCCCAACAAA CTACTACTCA AGAAGTAGCT 
CATAATACTT CCAATATACA ACTACAAACC TCGGAGGCTA CGCTAAATTT ACAAACCGGG 
ATTTTTGCTA AAGCTACTCA AGGTGTAACC AAAGACATCA TATTAGAAAA TAAAGATATT 
CGAGTAACTT TAAGTTCACA TGGAGCTAAG GTAAAGGAAG TTATACTTAA ACAATACAAA 
GATTATTTAG GCAAGCCTCT TAAACTCCTA GATGAGCAAT CCACTAACAT GGGTTTTCAG 
TTCACTTCCA ATCAAGCATC AATTAATACG AATACACTCT TTTTTAATAC AGATGATACT 
GATCAGTACA TACAACAAGC ATCTATAGGA AAAGTTACTT TTATGATTCC TTTAGGAGAG 
CCTAACCAAT ACTTACAGCA AGTTTATACT CTACCTAGCG AAGGTTATGC GCTCACACAA 
AATTGGGAAT TTGTAGGAAC AGAAAATTAT ATAGATCAAG GTAAAATAGA CTTTGTATGG 
CATGATTTTA TTAAAAGAGC CGAAAAAGAT GTACAAGCTT GCCGGAATAA AACTACTATT 
AACTACTACT TAGCCAACAA AACTTTCAAG CATTTAAAAG AACATACAGA GCAAAAAGAA 
GAACAAACTA TACAAACCCC TATCCAATGG TTAGCCATTA AGCAGAGGTT CTTTACTGCA 
GGCATTTTTA CAGACCAACC TTTCGAATCA GGCAATATTT TATTAAAACC GACTACACAG 
CCTGACAAAT TTGTTAAAGA AGCATACACT ACGGTAAGTT TAGCTTCTAA CAATTTACAA 
CCGATTCAAA AGGGTACATT TAGATTTTAT TTTGGACCTA ATACTTATAA GGATTTAAAC 
AGCTTTGCTC AAGGTTTTTC TAAAAATTTA CCTTTAGGCT GGCCCATTGT TAAGTGGATC 
AATTTATATC TTATCATCCC TATATTTTCA TTTATAGAAA AGTATGTAAG TAATTATGGC 
TTAGTTATAC TTATACTTGT CATTTTCATT AAGCTCTTGT TACTCCCGCT TTCTTACAAA 
TCCTATATTT CTATGGCTGA AATGAAGGTG CTAAAACCCA CCTTAGACGC CTTAAAAGCT 
AAATACGGAA ACGATATGCA AAGCGTGCAG ATGGAACAAG TAAAGCTTTA TAGGGAAATG 
GGAATCAATC CGCTAAGCGG CTGTATACCT GTATTATTAC AAATGCCTAT CCTATTAGCA 
ATGTTTAATT TTTTCCCCAA TGCTATAGAC TTACGACAAA AAGCTTTTTT GTGGGCTCCT 
GATTTATCAA CCTATGATGC TATTATCAAC TTACCCTTTC AAATACCCTT TTATGGAAGC 
CATGTAAGTT TATTTACTTT GTTGATGACA GCTTCTACCA TCCTATATAC CTGGTCTAGC 
AATCAAGTTA ATACACCACA AGGGCCTATG AAGACAATGT CTTACTTATT GCCTATTACA 
TTTATGTTTA TTCTTAACAG TTTCCCTGCT GGTTTAAGTT TCTACTATTT TGTCTCTAAC 
CTATTTACTT TTGCACAGCA AGCGCTTATA AAAAGGTTTG TAAACGAGGA TAAAATCAAG 
GCAAAGCTGG CTAAGAATAA GGAGAAATCA GCAAATAATA AAGAGGGCTC TTTTAAAAAG 
CGCTTTCAAG ATGCTATCAA GGCCTCTGCT AGCCATAAAG GAAAGAAATA G 

 

Protein sequence

MDKNKLIGLI LISILLIVYT HFFDNKLPKT SQQTTTQEVA HNTSNIQLQT SEATLNLQTG 
IFAKATQGVT KDIILENKDI RVTLSSHGAK VKEVILKQYK DYLGKPLKLL DEQSTNMGFQ 
FTSNQASINT NTLFFNTDDT DQYIQQASIG KVTFMIPLGE PNQYLQQVYT LPSEGYALTQ 
NWEFVGTENY IDQGKIDFVW HDFIKRAEKD VQACRNKTTI NYYLANKTFK HLKEHTEQKE 
EQTIQTPIQW LAIKQRFFTA GIFTDQPFES GNILLKPTTQ PDKFVKEAYT TVSLASNNLQ 
PIQKGTFRFY FGPNTYKDLN SFAQGFSKNL PLGWPIVKWI NLYLIIPIFS FIEKYVSNYG 
LVILILVIFI KLLLLPLSYK SYISMAEMKV LKPTLDALKA KYGNDMQSVQ MEQVKLYREM 
GINPLSGCIP VLLQMPILLA MFNFFPNAID LRQKAFLWAP DLSTYDAIIN LPFQIPFYGS 
HVSLFTLLMT ASTILYTWSS NQVNTPQGPM KTMSYLLPIT FMFILNSFPA GLSFYYFVSN 
LFTFAQQALI KRFVNEDKIK AKLAKNKEKS ANNKEGSFKK RFQDAIKASA SHKGKK