Gene Aasi_0182 details

Gene Information

• Locus tag: Aasi_0182
• Symbol: rplF
• ID: 6376458
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Amoebophilus asiaticus 5a2
• Kingdom: Bacteria
• Replicon accession: NC_010830
• Strand: -
• Start bp: 202942
• End bp: 203496
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 642681371
• Product: 50S ribosomal protein L6
• Protein accession: YP_001957356
• Protein GI: 189501639
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.280256
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCAAGAA TAGGAAAATT ACCCATTAAA TTACCCCAAG GCGTTACGTT AAGAGGTCCT 
GAAGAGGATA TAGTTTACGT AAAAGGACCT AAGGGAGAAT TGTCTCAATA TATAGACCCT 
GCTATAAGTG TTACTATAGA AAATGATACA GTTACACTAC ATAGAAGAAC TAACCAAAAG 
CGTCATAAGG CTTTACATGG TCTATATAGA GTGCTTATCA ATAATATGAT TATTGGTGTA 
AGCACAGGGT TTACAAAAAG CTTAGAGTTA GTGGGAGTAG GTTATAAAGC TAGTGTACAG 
GGCAATGCAC TTGACCTTGA CCTTGGCTAT TCACATAAGA TTTATTTTGT TATTCCACCA 
GAAATTAAAG TACAGGCTGA GACCACAAAA GGTAAGAATC CTTTAGTCCA TTTGGAAGGA 
ATAGATAAAC AACTGCTTGG GCAGGTGGCT GCTAAAATTA AAACATTAAG AAAAGTAGAG 
CCTTATAAAG GTAAGGGAAT ACGCTACTTA GGAGAACAGA TTAGACGTAA AGCAGGTAAA 
ACCGCTTCTA AATAG 

 

Protein sequence

MSRIGKLPIK LPQGVTLRGP EEDIVYVKGP KGELSQYIDP AISVTIENDT VTLHRRTNQK 
RHKALHGLYR VLINNMIIGV STGFTKSLEL VGVGYKASVQ GNALDLDLGY SHKIYFVIPP 
EIKVQAETTK GKNPLVHLEG IDKQLLGQVA AKIKTLRKVE PYKGKGIRYL GEQIRRKAGK 
TASK