Gene Aasi_0162 details

Gene Information

• Locus tag: Aasi_0162
• ID: 6376687
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Amoebophilus asiaticus 5a2
• Kingdom: Bacteria
• Replicon accession: NC_010830
• Strand: +
• Start bp: 187421
• End bp: 187891
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 642681351
• Product: SsrA-binding protein
• Protein accession: YP_001957336
• Protein GI: 189501619
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATGTAA AAAAGAATAA AACTACCGGA CTGGTTATTC GAAACAAACA AGCAAGCTTT 
GAATATACAT TTATAGATAA ATTCATCGCC GGGATTGTAC TTACTGGTAC AGAAATAAAA 
TCTATTAGAA AAGCTAAAGT TAGTTTACAG GAAGCCTATT GTTATTTTAA AAGTGGAGAA 
CTTTGGATTA AAAGTATGCA TATTGCACAG TATGAGCAAG GCAATATATA TAATCATGTA 
GAGAATAGAG AGAGAAAATT GCTTTTAACT AGAAAAGAGC TTAACAAGCT TATTAAAAAT 
CAGGAAAAAG GGCTTACCAT AATACCCATA CAGCTCTTTA TTGATGAAAA CAATCGTGCT 
AAATTGCAAA TTGCTTTAGC TAAAGGCAAA AAACTGTATG ACAAAAGACA GCACATTAAA 
GAAAGAGATG TACAAAGAGA TATGGAACGA CATCAAACTG CAAAATTTTA A 

 

Protein sequence

MNVKKNKTTG LVIRNKQASF EYTFIDKFIA GIVLTGTEIK SIRKAKVSLQ EAYCYFKSGE 
LWIKSMHIAQ YEQGNIYNHV ENRERKLLLT RKELNKLIKN QEKGLTIIPI QLFIDENNRA 
KLQIALAKGK KLYDKRQHIK ERDVQRDMER HQTAKF