Gene Aaci_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2963 
Symbol 
ID8417473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013206 
Strand
Start bp7916 
End bp9349 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content59% 
IMG OID645029089 
ProductType IV secretory pathway VirB11 protein involved in flagella biosynthesis-like protein 
Protein accessionYP_003186355 
Protein GI257792956 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGTGC ATGAGCTCCT GCCAAGCGAG CCCTTTCGCG CGGATCGGTA TGTGCTCGAG 
ACGCAGCGCG AGCGGGCCAA AGACTACGGT GAAGTGCCAT TTGACCGAGT GATCGAGGCG
TTTCAGCAGT ACCTCGGTGA GGAAGTCGGC GGGAAAGACG ACGTGGACTC GCAGTACCTG
CACCGCAAAT ACCGGGCGCT CATCGGGGAT GAGGCGGCGA AGCAGTATTT TATCCACCGC
ATCCATGACT TTTTGCGGGA ACGTCCCGAG TTTCAAAACA CGCGATATCC GCGGTACTAC
CCGGACTTGC CGGAAGCGAT CTTTCAACAC GCGCTCGGCT TCGGGCCCAT GAGCGTGTGG
TTTGCAAATC CTACGGAATC AGCGACGGTC AATGGAACGC AGATCCTGTT TGGCGTCAAG
GGGTCAAACA CGAAGGTCCT CCAACCCTTC GCGTTTGACT CCATCGACCA GGTGAAGCGG
TTGGTGCGCA CGCTCACCTT GCGCGACCCG GCGAACCAGG TCAATCAGAC GAATCATTGG
ACGCAGGTCG ATATGCTCAA TGGCACGCGC GTCACGATCT TCGCACCGCC CTTGTCGGAA
ACGTACGTGC TCGTCTTCCG GCAATACACC TTCCATCGCT ACACGTTCGA GCACGAGGCT
GAGATGCGCA CGATCCCGGC CGATTCTGTC GAGTGGTGGA AGCTCCTGAG CCGACTCATG
CTCACGATGG TGACGACCGG GATTCGACGG TCGGGGAAGA CCACGTTCTT GAAGGTCATC
TTTGGCGCGC GCGATCCGAA TCTCGAAGTG GTGACAGTGG AACGCGGCAC CTTTGAGGCC
CATCTGAAGC GAGACTTTCC AGAACGCGCG GGACGGATCA TTGCGCTCAA GTCACCGCTC
GATGAGATGG CATCCCTATT CCCGGCGTTT CTACGGTCGG ACGCGCACTA CATGATGGTG
CCGGAGATCC GAAGCAGTGA GGTCGATTTG CTCATCCTGT CGCGCGAGCG CGGCAACGGA
TGTTTGGCAA GCTATCACAG TCCGTACGTG ACGAACATCC CGCGAGAGCT TGCGGATTTG
GCACTCGAGA ACAATCCGAG CCGGGATTAT CGGGCGACCT ACATCCGCAC GGCGCAAAGC
CTCGATGTCG CGATCACGAT GTGGGAGGAC CCGACGGGGC GAAAGATTGT GACGGGCGTC
TACGCTTATG AATTCGACCA TGAGACGGAA TCCTACACGG TCACGACGTG GATGAAGTAT
CACCGCGCCA CAGATACTTG GACGTTCCAC GCGGAGATTC CGCCGTCCAT GCGGGCGCGC
TTGGAGGATA CGTACCCGGA CGTTTTGGCG GCGTTTGAGG CGGAGTTTCA GCGTTTGGCG
TCGGCGTATC CATTCCAGGG CGAGGCCAAG CGTCGCGTGA AGATTGGGGG GTGA
 
Protein sequence
MSVHELLPSE PFRADRYVLE TQRERAKDYG EVPFDRVIEA FQQYLGEEVG GKDDVDSQYL 
HRKYRALIGD EAAKQYFIHR IHDFLRERPE FQNTRYPRYY PDLPEAIFQH ALGFGPMSVW
FANPTESATV NGTQILFGVK GSNTKVLQPF AFDSIDQVKR LVRTLTLRDP ANQVNQTNHW
TQVDMLNGTR VTIFAPPLSE TYVLVFRQYT FHRYTFEHEA EMRTIPADSV EWWKLLSRLM
LTMVTTGIRR SGKTTFLKVI FGARDPNLEV VTVERGTFEA HLKRDFPERA GRIIALKSPL
DEMASLFPAF LRSDAHYMMV PEIRSSEVDL LILSRERGNG CLASYHSPYV TNIPRELADL
ALENNPSRDY RATYIRTAQS LDVAITMWED PTGRKIVTGV YAYEFDHETE SYTVTTWMKY
HRATDTWTFH AEIPPSMRAR LEDTYPDVLA AFEAEFQRLA SAYPFQGEAK RRVKIGG