Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2900 |
Symbol | |
ID | 8426441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2969129 |
End bp | 2970556 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645029027 |
Product | sugar transporter |
Protein accession | YP_003186293 |
Protein GI | 258512859 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.407104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACTC AGCAGACACA AGGCTCTCGC GCCTACGCGG TGACCATCTC GCTGGCGGCA GCGATGGGAG GGCTGCTCTA CGGCTACGAT ACCGCGGTCA TTTCGGGAGC CATCGGTTTC TTGAAAACGC TCTATCACCT CTCGCCCTTC ATGCAGGGAT TGGTCATCTC GAGCATCATG ATCGGCGGCG TCATCGGCGT GGCCGTCTCC GGCTTCTTGA GCGATCGCGT CGGCCGCCGC AAGGTCCTCA TGACGGCCGC CGTTCTGTTC GCGGTGGCGG CGTTTGTGTC TGCCATCTCC TCCGATGTCA CCACGCTCAT TCTTGCGCGA ATCGTCGGAG GCCTCGGCAT CGGCATGGGA TCGGCGCTCT CGGTGACCTA CATCTCCGAG TGTGCGCCGA CGCAGATCCG CGGGGCGCTG TCGTCGCTGT ATCAGCTGCT CACCATCATC GGCATCTTTC TCACCTATCT CACCAACTAC TTGATTCAAC GCTCCGGATC GGTCGCCTGG GACGTGCACA CGGGTTGGCG CTGGATGCTG GGGCTGGGCT GCGTGCCAGC GGCTATCTTC TTTTTCGTCC TTCTGTTTGC ACCCGAGAGT CCGCGGTGGT TGGCGAAGGT CGGCCGGATC GACGAGGCGC TGCGGATCTT GGTGCGCATC AATGGGCCGA GTGCTGGTCA ACGTGAACTC GAGTCCATTC GCGAATCGAT TGCGAGTGAA AGCGCTGCAA GCATCCGCGA TCTTCTGAAA CCCGGTTGGC GCAAGGCGCT TGGTGTCGGG ATTCTTCTTG CGCTGTTCAA TCAAATCATC GGCATGAACG CCGTGACGTA TTACGGCCCC GAAATCTTCA GGATGGTGGG GTTCAGTCTC AACTCCGATT TCGAGATTCA AGCGTTCTTC GGCGCCATGT GGGTCGTGTT TACCGTTGTC GCGGTCGTCC TGATCGATCG CGTCGGCAGA AAGCCCCTGA TGATCGTCGG CTCCGCGCTG ATGGCCATCT TCATGGCGCT GATGGGCTTG ACCTTTTACC TGCACGTTCA CAACGGGTTC TGGCTCGTGC TCTTCATCAT GGGCTTCACG GCGGCGTTCA GCGTGTCGAT GGGTCCGATT CCTTGGATCA TGATTCCGGA AATCTTTCCG AATCACCTGC GCGCCCGCGC GGCCGGCGTG GCAACCATCT TCCTGTGGGG AGCCAACTGG GCCATCGGCC AGTTTACGCC AGTATTGCTG AACGATTTCG GCGGCGCCTA CACCTTCTGG ATGTTTGCAG TCATCAACAT CCTTGGGGTG CTGTTCGTCA CGGCCTGGGT GCCGGAGACG AAAAACCGTT CCCTGGAGGA GATCGAATCC ATCTGGATGG CTTCGGGGCG CGGGGTGTCG CTGTCGCAAC GAGACGCGCA CGAACGCGCG AAGCGCGCCC ATTTTTGA
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Protein sequence | MSTQQTQGSR AYAVTISLAA AMGGLLYGYD TAVISGAIGF LKTLYHLSPF MQGLVISSIM IGGVIGVAVS GFLSDRVGRR KVLMTAAVLF AVAAFVSAIS SDVTTLILAR IVGGLGIGMG SALSVTYISE CAPTQIRGAL SSLYQLLTII GIFLTYLTNY LIQRSGSVAW DVHTGWRWML GLGCVPAAIF FFVLLFAPES PRWLAKVGRI DEALRILVRI NGPSAGQREL ESIRESIASE SAASIRDLLK PGWRKALGVG ILLALFNQII GMNAVTYYGP EIFRMVGFSL NSDFEIQAFF GAMWVVFTVV AVVLIDRVGR KPLMIVGSAL MAIFMALMGL TFYLHVHNGF WLVLFIMGFT AAFSVSMGPI PWIMIPEIFP NHLRARAAGV ATIFLWGANW AIGQFTPVLL NDFGGAYTFW MFAVINILGV LFVTAWVPET KNRSLEEIES IWMASGRGVS LSQRDAHERA KRAHF
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