Gene Aaci_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2711 
Symbol 
ID8426252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2776161 
End bp2776796 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID645028838 
Product50S ribosomal protein L3 
Protein accessionYP_003186104 
Protein GI258512670 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000399657 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGGGA TTCTCGGGCG CAAACTCGGC ATGACGCAGG TCTTCACGGA GGACGGAGAC 
GTCGTGCCGG TGACGGTGAT CGAGGCGGGC CCGTGTGTCG TGCTTCAGAA GCGCGTCTTG 
GACAAGGACG GCTATGAGGC CATTCAACTG GGCTTTGCGG ACAAGAAGGC GAGCCGCGCG 
ACGAAACCGG AAATAGGTCA TGCTGCGAAG GCTGGCACGG CTCCCAAGCG GTACATCCGC 
GAAATCCGCG GCGTGAACGT GGAGGAGTAC GAGGTCGGGC AACAGTTGAA GGCGGACATT 
TTCGCGCCTG GCGATATGGT CGACGTGACC GGTGTGTCGA AAGGCAAGGG TTTTGCAGGC 
CCCATTAAGC GCCACAACCA GCACCGTGGG CCGATGGCGC ACGGTTCCAA GTACCACCGC 
GGCGTGGGTT CGCTGGGTTC CATCGCGCCG AACCGCACGT TCAAGGGTCA GACGATGGCC 
GGTCGCATGG GCGGCGAGCG CGTGACCGTG CAAAATCTCG AGGTTGTGAA GGTTGATCCG 
GAAAAGAACG TGATCCTCAT CAAGGGTTCC GTTCCTGGGC CTCGGAATTC GTTCGTGACG 
ATTCGGTCTG CTGTGAAGCA GCCCGCCAAG AAGTGA
 
Protein sequence
MKGILGRKLG MTQVFTEDGD VVPVTVIEAG PCVVLQKRVL DKDGYEAIQL GFADKKASRA 
TKPEIGHAAK AGTAPKRYIR EIRGVNVEEY EVGQQLKADI FAPGDMVDVT GVSKGKGFAG 
PIKRHNQHRG PMAHGSKYHR GVGSLGSIAP NRTFKGQTMA GRMGGERVTV QNLEVVKVDP 
EKNVILIKGS VPGPRNSFVT IRSAVKQPAK K