| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2516 |
|---|
| Symbol | |
|---|
| ID | 8426045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2584270 |
|---|
| End bp | 2585085 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645028633 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_003185910 |
|---|
| Protein GI | 258512476 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.610941 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGGA GCGTGTGCAC CACCGGGATG AAGGAGCGGT CCCTCGAGGA CATCCTGAAG
CTCGTCCGCG CCTGGCGGGC GTCCGGCGTC CGCGTGGACG GCCTGGAGCT GTGGGTCGGC
CATGTCGAGC CCTATGCCGC GGCTGGGCGG ATGGCGCTCG AGGAACTCGC GTCGAGGCTC
GCCGACGAGG GACTCAGCGT GCCGGTCATC AGCGGCTACA CCTATTTCTC CCGCAGCCCG
CGCGACCGCG ACTCCGACCT CCGGGACGTG CGCCGCTATG CCGAGATGGC CTCCGCGCTT
GGCGGCCCTG CCATTCGGAC GTTCTTCGGC CACCTGCCTT CGCGCGCGGC GAGCCCCGAG
CTGTGGGATG AGTCCCTGGC CGCACTGGTC GAAGCGCGGA TCATCGCGCG AGGCATGGGA
TCGGACCTCC TGGTGGAGAC CCATTACCAG ACGTTTGCGG ATTCCCTCGA CAGCCTGCGC
AGTCTGCTCC ACTCGGTTCC GGGCGGCGAT CTCGGCCTGA TCTTCGATGC TGCCAACTTT
AACCCGGACC ACCTCGACCC GCTCGAAGTG CTTCGGGAGG TGTATCCAGC CGTTCGGCAC
GTGCACTGCA AAAACTACCA TTGGAATCAT GAGGCGTGGT ACCAGAGCGT CCCAGTCTCG
GCGTTCGATC CGTCGGGAGA CGTGGACAAC GACCGCGTGC TGCGGGAACT TGCCGCGCGC
GGATATCAGG GATTCGTGTC GCTCGAGTAC TTCGGGCGTC GAGGCTTTCC GGCGCTTTTG
CGATCGCTCG AAGAGGCGAG ATGGCGGTCG GCGTAA
|
|---|
| Protein sequence | MKWSVCTTGM KERSLEDILK LVRAWRASGV RVDGLELWVG HVEPYAAAGR MALEELASRL
ADEGLSVPVI SGYTYFSRSP RDRDSDLRDV RRYAEMASAL GGPAIRTFFG HLPSRAASPE
LWDESLAALV EARIIARGMG SDLLVETHYQ TFADSLDSLR SLLHSVPGGD LGLIFDAANF
NPDHLDPLEV LREVYPAVRH VHCKNYHWNH EAWYQSVPVS AFDPSGDVDN DRVLRELAAR
GYQGFVSLEY FGRRGFPALL RSLEEARWRS A
|
|---|
| |