Gene Aaci_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2400 
Symbol 
ID8425929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2462479 
End bp2464083 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content67% 
IMG OID645028519 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003185796 
Protein GI258512362 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0669706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCTC CTTTGTTCTT GGATCAGTTC GAAACCACCC TGCGCGACCA TCCGGAGCAA 
ATCGCCGTCA TCGACCTCTC CGGCGACGAG CCCGTCATGC TCACCTACGC GGAGCTCGAC
CGGCTTGCGG CGCGCATCGC GGCGCGCCTG CTTCAGCTCG ACGTGAAACC CGGCGAGGCT
GTGGCGTATC AGCTTCCGAG CGGCTGGCCG TTTGTGGCGC TGACGCTCGC CATCTGGAAG
GTGGGCGCCA CGCCGTGCCC GCTTCTGCCC CAGCTTCGCG AACGCGAGGT GGCCTTCATC
CTGAACTCGT CCGAGAGCCG CGTGTTCATC GCGCCGGACG TGTTCCGCCG CTTCGACTAC
CGGCCGTTGG TCGAGAGCAT CCTGAAGGAA GCACCGCGCG TCGAACACGC GCTCATCCTG
CCGACGTCCC CGTACGACCC GCTTTCGTCC GATCTCGGCG GCCTTCTCGC GCCGGAGGCA
GACGCCGAGG CGGCGAAGGA GGCGCTTTCG GCGAGAAAGC CTGGGCCGGA CAGCCACTCG
CAGCTTCTGT ACACGTCCGG CACCACCGGC GAGCCGAAGG GCGTGCTGCA CACGCACCGG
ACGCTTTCCG AGGCGCTTCT CATCCACACG CGCACGCTCG GGCTCACGTC GAAGGACCGG
ATCTGGGTGC CCTCCCCGAC CGCTCACCAG ACAGGATTTC TCTACGGAAT GCTCGTTTCC
TTCTATATTG GGGCCCCGGG AATTTATCAC GCCATCTGGG ACGTGGACAA GGCGCGCGCG
GCCATCGAGG AGCACGGCGC GACGTTCGTC CAGGCCGCGA TGCCGTTTCT CTCGGACATC
ACCCGCGCGG ACAGGCCGCC TAAGGGTCTT CGGCTCTTCA TCGCCACCGG CGCCGCCATC
CCGCGCCAAC TGGCGCAGGA AGCGCGCGAA CGGCTTCAGT GCGCCGTCGT CGGCGCATGG
GGGTCCACCG AATCGTGCCT CGTCACCGTC GGCCGGCCGT CGGATCCGCC GGAGAAACTC
TGGGGCACGG ACGGGCGCGT GCTCGACGGC ATGCAGATCC GCGTGGTGGA CGACGAGGGC
CGCGAGCTCC CGCCCGGCAC CGAGGGCAAC TTCCAGGTGA AGACGCCCGC CATGTTCGTC
ACCTACCTCC ACCACCCCGA GTGGTACGAG GCGGCCATGA CGCCGGACGG CTTTTTTGAC
ACGGGCGATC TCGCCGTGAT CGACGAGGAC GGGTATCTGC GCATCACGGG CCGCAAGAAG
GACGTGGTGA ACCGCGGTGG CGAGAAGATC CCGGTGGTGG AGATTGAGGA CCTCCTCTAC
CAGCACCCGG ACATCGCCGA CGCGGCCGTG GTGGCCATGC CGGACGAGCG GCTCGGCGAG
CGCGCCTGCG CCTACGTGGT GCTGAAACCG GGCGCCAAGC GGCTGGAACT GTGCGACATC
ACGGATTTCC TCGGCGAGCG CGGCATGGCG AAAATCTACT GGCCGGAGCG ACTCGAGATC
ATCGACGAGA TGCCGCGGAC CGCGAGCGGC AAGATTCAGA AGTACGTGCT GCGCCAGGAC
ATCCAGCAGA AACTGGAGCG CGAGCGCGCG GAGAAGACGG GCTGA
 
Protein sequence
MSAPLFLDQF ETTLRDHPEQ IAVIDLSGDE PVMLTYAELD RLAARIAARL LQLDVKPGEA 
VAYQLPSGWP FVALTLAIWK VGATPCPLLP QLREREVAFI LNSSESRVFI APDVFRRFDY
RPLVESILKE APRVEHALIL PTSPYDPLSS DLGGLLAPEA DAEAAKEALS ARKPGPDSHS
QLLYTSGTTG EPKGVLHTHR TLSEALLIHT RTLGLTSKDR IWVPSPTAHQ TGFLYGMLVS
FYIGAPGIYH AIWDVDKARA AIEEHGATFV QAAMPFLSDI TRADRPPKGL RLFIATGAAI
PRQLAQEARE RLQCAVVGAW GSTESCLVTV GRPSDPPEKL WGTDGRVLDG MQIRVVDDEG
RELPPGTEGN FQVKTPAMFV TYLHHPEWYE AAMTPDGFFD TGDLAVIDED GYLRITGRKK
DVVNRGGEKI PVVEIEDLLY QHPDIADAAV VAMPDERLGE RACAYVVLKP GAKRLELCDI
TDFLGERGMA KIYWPERLEI IDEMPRTASG KIQKYVLRQD IQQKLERERA EKTG