Gene Aaci_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2217 
Symbol 
ID8425745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2276163 
End bp2277233 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content66% 
IMG OID645028337 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_003185615 
Protein GI258512181 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0743158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGATCT CGTCAGAAAA GCGGAGAGGC CGGCGCGTCG GCGCCGCGAT CGGCCTTGTG 
CTCGCCCTTC TGGCGCTTCT CGTGATAGCG CTCGTCGTAT GGCGATCTCG GCATTCCTTG 
CCTGTGGTCC AGACGGCGCC TGTTTCGCTC CAGCGAATCG AGCGGGTGAC ACTGGCGTCA 
GGCACAGTCC GACCGGTGGC TCGCCAGATC GTTAACTTGG ACAACCTGTC GGGTCCCGTT 
CAGCGCGTGC TGGTGCACGT GGGGGAGCAC GTGCAAGCGG GGCAACCGCT CATTCAGTTG 
AGCACGGCCT CTGCGGACGC CAGCGTGCAG GCCGCGGAAT CGGCGCTCTC CGATGCCGAG 
TCGGCGTATC AGCGCGTGTT GGCGCAATAT AATCAGGCGC CGACGGCGCT CAAGGCGCTG 
TTTCTGCCGC AGCTGAACGC GGCCGAGGCT TCGGTGGCGT CGGCGAGGAG CCAGCTCGCA 
GAGGCCCAGG CCAACGAGGC CCAGTTGACC ATCACGGCGA CGATGTCGGG CATGGTACTG 
ATTGCGAACC CGAACGGCGT GGACGCAGAC GGAAATCAGA CGCCCGTCGT CGAGGTGGCC 
AGCCCAGCGA AAGACGTCGT CATGGACCTG TCGGAGGTCG ACGCGGCCCA GGTGAAGGTC 
GGCATGACCG CCACCATGCA GACGGACGCC TATCCCAACC AGACGTTTAC CGGCGTGGTG 
ACGTCCATCG CGCCGTATGC CGAACTCTCC TCGAGCGGCG CCCCGGTCGT GGAGGTGACC 
GTGCAGCCGC GCGGATCGTT TCCCGTTCCG TACGGGTATC AGCTCACCTG CCGGATCCTC 
AGCCGCTCGC CATCGCCGGT GCCCACGGTG CCCTACAGCG CCATTGTGCA GAACGGAACC 
GGCTATGCGG TGTACGAGTG GAGGAACGGG CGCGTGTATC TGGTGCCGGT CAAGCTCGGC 
ATGACGAGCG ATACGGCGGT GCAGGTGCTG TCCGGGGTGG CGCCTGGCGA TCGCGTCGTG 
ATCAATCCAC CGGACAATCT CGTGAACGGA GAGGCAGTGC GCACATCATG A
 
Protein sequence
MAISSEKRRG RRVGAAIGLV LALLALLVIA LVVWRSRHSL PVVQTAPVSL QRIERVTLAS 
GTVRPVARQI VNLDNLSGPV QRVLVHVGEH VQAGQPLIQL STASADASVQ AAESALSDAE 
SAYQRVLAQY NQAPTALKAL FLPQLNAAEA SVASARSQLA EAQANEAQLT ITATMSGMVL 
IANPNGVDAD GNQTPVVEVA SPAKDVVMDL SEVDAAQVKV GMTATMQTDA YPNQTFTGVV 
TSIAPYAELS SSGAPVVEVT VQPRGSFPVP YGYQLTCRIL SRSPSPVPTV PYSAIVQNGT 
GYAVYEWRNG RVYLVPVKLG MTSDTAVQVL SGVAPGDRVV INPPDNLVNG EAVRTS