Gene Aaci_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2017 
Symbol 
ID8425539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2062578 
End bp2063768 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content68% 
IMG OID645028134 
Productribosome biogenesis GTPase YqeH 
Protein accessionYP_003185418 
Protein GI258511984 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID[TIGR03597] ribosome biogenesis GTPase YqeH 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA CCCGAGTGTG TGTGGGATGT GGGGCACCGC TCCAGTCGAC GGACGAGCGG 
ATGCCGGGGT ACGTGCCGGA GAGCCACTTG GAGCGGGAAG ATGTGCTCTG CCGGCGCTGT
TTTCGCATTC GCCACTACGG CGATTTTACG CCCATCGCCG TGGACGAAGA GACGTACCAG
CGACAGGTCG CGGCCATCTT CGATCGCCCC GGGCTCGTGC TGTACGTGGT CGACGTGTTC
GATCTCGCCG GAAGCCTCAT CCCGAGCGCG CGGCGATTCG TCGCGTCGAG CGACGTGATC
GTCGTGGTCA ACAAGGTGGA TCTTCTGCCG ACCGATGTGG GCTATGAGGC GCTCGCGGAC
TGGATCCGCG GCGAGGTGCG CGCGACGGGC GTGGAGCCGC TCGATGTGGC GTTCATCAGC
GCCGAGAAGC GGCGCGGCGT CGACCGGCTC GTGGATCGCG TCGCGCGGGA GACCAAGCGG
CCGGTGTACG TGATCGGCAT GGCCAATGTG GGCAAGTCGA CGCTTCTCAA CGCGATGGTC
GAGCGGCTGT CGGAGCGGAA GCAGCCATTC ACCGTGTCGC GCAGGCCGGG CACGACGCTC
GCCATGTCGC GACTCGAGAT TGAAGGGCCC TACGGCCGCG TGGAACTGTT TGACACGCCG
GGGCTGATGT ACACGTCGCG CGTCATCGAG CGGCTGTGCG GCGACTGTTT GAAGTGGGTG
GTGCCGCGGA CGCGCGTGCG CCCGCGCGTG TACCAGTTGA ACCCGGGCCA GGCGCTGTTT
CTCGGCGGCT TGGTGCGCCT CGAGACGTTG GGGGGCGAGC GCCAGGGCAT TGTGCTCTAT
GTCTCGAACG AGCTCCCGGT GCACCGGACC AAGCGGGAAC GGGCGGATCA GTTTTTTGCG
GATCACCGCT ACGACATCCT GAAGGTCCCG TGCGAGGCGT GCGCGGATGC GTTCGCCGAT
CGGCGCTCCT GGCTCGTCGC GGCGCCGCCG CGGCGCGACG CCGATTTCTC TTTGGGCAAA
CGGGGCGGGG ATATCGTCCT GCCCGGGCTC GGCTGGATCG CGTGGACGGG CCGCAGGACG
CTGGCGCGGA TTGAGGCGCC TGCGTGGCTC ACTGTCTCCA TGAGGCCGAG GCTCGTCGGC
GTTCTCGCGC ACCGCGTGCA ACACCCGCAG GCCGGGGGTG ACGGGCCGTG A
 
Protein sequence
MTDTRVCVGC GAPLQSTDER MPGYVPESHL EREDVLCRRC FRIRHYGDFT PIAVDEETYQ 
RQVAAIFDRP GLVLYVVDVF DLAGSLIPSA RRFVASSDVI VVVNKVDLLP TDVGYEALAD
WIRGEVRATG VEPLDVAFIS AEKRRGVDRL VDRVARETKR PVYVIGMANV GKSTLLNAMV
ERLSERKQPF TVSRRPGTTL AMSRLEIEGP YGRVELFDTP GLMYTSRVIE RLCGDCLKWV
VPRTRVRPRV YQLNPGQALF LGGLVRLETL GGERQGIVLY VSNELPVHRT KRERADQFFA
DHRYDILKVP CEACADAFAD RRSWLVAAPP RRDADFSLGK RGGDIVLPGL GWIAWTGRRT
LARIEAPAWL TVSMRPRLVG VLAHRVQHPQ AGGDGP