Gene Aaci_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1963 
Symbol 
ID8425484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp2011224 
End bp2012375 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content62% 
IMG OID645028079 
Productgermination protein, Ger(x)C family 
Protein accessionYP_003185364 
Protein GI258511930 
COG category 
COG ID 
TIGRFAM ID[TIGR02887] germination protein, Ger(x)C family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0735591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCC GGCGCGCGCG CTGGCTGCTC GCCGCGCAGG CGGCTGCGCT CCTCTTCCTT 
GCGAGCGGAT GCGGCGACTA CCAGAAGATC AACGACCGCT CGCAGATCAT CGGCATCGGC 
GTGGATCCGG TGCCGGACAA GCCGGACATG CTGGCCTTCA CGCTTCAGGT TCCCAATCTG 
GAAGTCACAA CGTCGCAGAG CCCAGGTCTT GGCACCGGCG GGCGCCAGGG GGGCGAGGCC 
GTTCCCTACA AGAACTTTTA CGTCGAGGCG ACCTCGGTGC AATCCGCCAT CTCCCGCGCC 
CAGACGATGT ACGACAAGGC GTTTTTTCTC GGCAATCTGG AGGCGGTCGT GTTCCAGACG 
GGCCTGAGCG AGCGGGATCT CACCCGCGTC ACGGAACAAT TGATGCGAGA CGAGACCATC 
GACAAGCTCG CGTACGTCGT GGCGACCCGA GATTCGGCGC GGTCCGTCCT GGAGGCGAGG 
ACCAACGCGC CTCCGGCGAC CACCATTGAA GCGATGTGGT ACAACGACAT GCCCCAGCGA 
GGTTATTCGG CACCGGAAAA ATTGTGGCAA TTTTGGAGGG ACGCTGAGCT CATCGGCCGG 
GAGCCACACG TCCCACTCGT GGAAGCGGCG GATGACAGCC TCCGAATCGA AGGCACGGAG 
CTGTATTTTG GCTATCAGCC GGTCGGATGG CTCACGCCGG ACGATACCGT ATTTTACAAC 
TTTCTCACAG GTCAGGTTCG CGCCATTTCC ATCTCCATCC CCGACGGGGA TCGGTCGTTC 
GACATCCGCG TCGTCCGCAC GCGGATCCAT CTCCGCGAAA TTCCGACGCC GCAGGGCATG 
GTGTTGTGCG ACGACATCCA CATTCGCGCC AATCTGAACT CCACGGAGAC CATGGCGCAG 
CGCCCGCTCA CGAATCGGGA GGTGGAGCGA TATGAGGACG TCGTGGAGCG GTATCTGCGA 
GACAACTGTG TGCGAGTCCT TCGCGCGCTT CAATCCGTCC AGGCCGACAC CATCGGATTT 
GGCTATCGTT ACCTGATCCG TCACCCCGAG CGCATCTACG AGATTCGAGA TCACTGGGGA 
GACGCGTTCG GTCGCGCGCG CATCCACGTG ACCGTGACCT GCCGCATCTC GCGCGAGGGC 
AATCTTCTCT GA
 
Protein sequence
MTIRRARWLL AAQAAALLFL ASGCGDYQKI NDRSQIIGIG VDPVPDKPDM LAFTLQVPNL 
EVTTSQSPGL GTGGRQGGEA VPYKNFYVEA TSVQSAISRA QTMYDKAFFL GNLEAVVFQT 
GLSERDLTRV TEQLMRDETI DKLAYVVATR DSARSVLEAR TNAPPATTIE AMWYNDMPQR 
GYSAPEKLWQ FWRDAELIGR EPHVPLVEAA DDSLRIEGTE LYFGYQPVGW LTPDDTVFYN 
FLTGQVRAIS ISIPDGDRSF DIRVVRTRIH LREIPTPQGM VLCDDIHIRA NLNSTETMAQ 
RPLTNREVER YEDVVERYLR DNCVRVLRAL QSVQADTIGF GYRYLIRHPE RIYEIRDHWG 
DAFGRARIHV TVTCRISREG NLL