Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1438 |
Symbol | |
ID | 8424945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 1489915 |
End bp | 1490823 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645027552 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_003184852 |
Protein GI | 258511418 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAGCGT TAGACGGTGT CCTGCTCATC GATAAACCCC AGGGGATGAC GTCGCACGAC GTGGTCAATC GCGTCCGCCG CAAGCTCGGC GTGCGGCGCG TTGGGCACGC GGGCACGCTC GACCCGATGG CGACGGGTCT CCTGATGATC TGTGTGGGCC GCGTCACCCG CCTCCTGGAG TACCTCGGCC AGGGCGACAA GGATTACAGC GGCACCGTGG TGTTCGGCGT CGGCACGGAC ACCGACGACG CGGAGGGCAC GGTCGTGGCC CAGGCGTCGG CCGCGGGTCT GGATCTCGCC GCAGTGCGGC AGGCCGCGCT CCGGCTCACC GGCGAAATTC GCCAGCGGCC GCCTCAATAC TCCGCGGTTC ACATCGACGG CCGCCGGGCC TACGATCTCG CTCGCCAGGG CAAGAAGGTG GAGCTTCCAG AGCGGACCGT CCGCGTTCAA GCGTTCACCC TCGACGAGTT CCGTCACGAA GGCGAACTCG CCGTGGCCCG CTTTCACGTC CGCTGCTCCA AGGGCACTTA CGTCCGGGCC CTGTGCCGCG ATCTCGGCGC GCTGGTCGGC CTCCCCGCTC ACATGCGCTC GCTGCGCCGG CTCGCCATCG GCAGCGCGCG CGTCGAGGAC GCCATATCCC TCGACGACTG GATGGCCTCG GGTGACCCCG CTTCGCACCT GCGCGATCCG CTCCTGTACC TGGAAGGCCT GCCGATGTGG CAGCCCCCGC GCGAGGTGTT GGAGCGCCTC GCGAACGGCC AGACGGTCGA GGTGGGCGAC CTGCTGTCGC TGTCGCCTGG CGATCTCGTC CTCGTGATTG ACGCCGGCGC CGTGGCCGCC GTCGGCGAAG TCGTCGATCA CCAACCGGCC GCGGTGCGGC CGAAGAAGGT GTTTTGGAAG AGGGGATGA
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Protein sequence | MQALDGVLLI DKPQGMTSHD VVNRVRRKLG VRRVGHAGTL DPMATGLLMI CVGRVTRLLE YLGQGDKDYS GTVVFGVGTD TDDAEGTVVA QASAAGLDLA AVRQAALRLT GEIRQRPPQY SAVHIDGRRA YDLARQGKKV ELPERTVRVQ AFTLDEFRHE GELAVARFHV RCSKGTYVRA LCRDLGALVG LPAHMRSLRR LAIGSARVED AISLDDWMAS GDPASHLRDP LLYLEGLPMW QPPREVLERL ANGQTVEVGD LLSLSPGDLV LVIDAGAVAA VGEVVDHQPA AVRPKKVFWK RG
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