Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1312 |
Symbol | |
ID | 8424816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 1362649 |
End bp | 1363905 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645027426 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003184729 |
Protein GI | 258511295 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCCCG ACGACGTGGT CACCCGCCTC GGGATGCAGA TGAAGTGGAA AACGTGGTGG AATTTCCGAA TCGATTTTGG CGGCTCGGTC CTGTTCGCCC TATTCAATGT CGTGGTCAAC CAGTTTTACG TCCCCATGGC CATCCGACAC GGAGTATCCA ACCTCGAGGT TGGGTTGCTC ACGGCGGCGC CTGCCATCGG CATGCTTTGG TCCCCGATGT GGGCCCACCT GATGCGCGGG CGATCGACAA AGCCTTTTGT CCTGTGGCCG CTCGTCGTCG GCCGGCTGTC CGTCCTGTTG GCAGGTGCTC TGCTGACGCC CGCTGCCTTC CTCGTGACGG CGTTCATCGT GAACTTCATG AACGGGATTC AGGCGCCCGC CTATCCCGCG CTGCTCGCCC GCATGTACCC GCCCGCACTC CGGGGGCGGC TGATGGGTTA CGTGCGCGTC GCGCAGGGGA CGCTCCTCAT CCCCCTCGCC TACGTCGTCG GCGAATGGAG CCAGCATCAG GGCGACCGGT GGCCGCTCAT CGGCGCCGCC ATCATGGGGA CGCTGTCGGT CATTCTGTTC TCCCGCGTGC GAGAGGTGGA AACGCCAGGT CCGGAGGCGA CTTCGACGCA GTCCGCGAGA CGAATCACGC AAATCTTCGG GCATTGGCAG GTGGCCCGCG CCAGCCGGCC TCTGACCATC TTCCTGATGG CCACCATGGC CACCGGCTTC GGCAACCTGT TGGCGGGACC GATTTACCAG ATCTATCAGG TCCATACCTT GAACCTGTCC AACGCCCAGA TCGGCGTGAC GCGCGTGTCG TACTACGTGG CCCTGTTGGT GGCCTATTTT GTCGTGGGGT GGATCATCGA CACGTGGTCG CCGCGCCACG CCATGTTCAT CGGCATGAGT GCCTACGCCC TCGCCCCGGC GCTGTACGTG CTCAGCGGCT CGTTTGCGGC CGTGATCGCC TCCTGCGCCC TGCTTGGCGT CGGCGATGCC GTCTGGGACA TCGGCTGCAT GTCCTACATC TTTCGCGCGG TCCCCGGGCG AGAAGCCGAG GCGTTTGGGC TTCATTTCCT TCTGTTCGGG ATCCGCGGCG CCATTGCGCC GCTGGTCAGC ACGGCGATGA CACACGCGAT GTCGCTCACG GACATTTTCC TCGTCGCCAT CGGCATCTGC GCGCTTGGCA TCGCCATTTT CGCCGTGCCG CCCACGCCGC GGGCGCCATC GCCCACGGTC GAAGCGCCAG AGCCCGGTGC CCCGTGA
|
Protein sequence | MSPDDVVTRL GMQMKWKTWW NFRIDFGGSV LFALFNVVVN QFYVPMAIRH GVSNLEVGLL TAAPAIGMLW SPMWAHLMRG RSTKPFVLWP LVVGRLSVLL AGALLTPAAF LVTAFIVNFM NGIQAPAYPA LLARMYPPAL RGRLMGYVRV AQGTLLIPLA YVVGEWSQHQ GDRWPLIGAA IMGTLSVILF SRVREVETPG PEATSTQSAR RITQIFGHWQ VARASRPLTI FLMATMATGF GNLLAGPIYQ IYQVHTLNLS NAQIGVTRVS YYVALLVAYF VVGWIIDTWS PRHAMFIGMS AYALAPALYV LSGSFAAVIA SCALLGVGDA VWDIGCMSYI FRAVPGREAE AFGLHFLLFG IRGAIAPLVS TAMTHAMSLT DIFLVAIGIC ALGIAIFAVP PTPRAPSPTV EAPEPGAP
|
| |