Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1079 |
Symbol | |
ID | 8424579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 1140793 |
End bp | 1143903 |
Gene Length | 3111 bp |
Protein Length | 1036 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645027197 |
Product | DNA primase small subunit |
Protein accession | YP_003184505 |
Protein GI | 258511071 |
COG category | [R] General function prediction only |
COG ID | [COG3378] Predicted ATPase |
TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGGG ACTGCAAACT GTGCAATTCT CCCATTCGAG AGGAAATCGA AACTCGGTGG TTGGCTGGAG AAAGCTACCG GGAGCTCGAA GCGAGGTGTG TGGAGCTTGG TGAAGAGATC TCCGATTCGG GGATTCGGCG GCACATGATC GAGCATGCGT TCTGCGGGGA TCCCGCCGAG TCGGTCGATT TCCTGCGATG GTGGTTCGAG GGGGCGGCAG GCTACGTGGA GATCAGGCCG ATCCCGAACC GGAAGGACGA TCGGGAGATG GCGTTCAAAG CCGTTAAGGC GCGGCGCTCG TTCGCAACGA CGGACTTTGA GGCGTTGCGC GACTACTTCG GCAGAGGCTA TCAGAGCACG GATATGGCGC GTTGCGGCTG GTACTTCGGA GTCTGTCTCC GCGATAAGCC GGTGCAACGG ACCGAGGATG GCCGCTGGAG CGGTGGCAGC GCAGAGGACG TGGTGGCATG TCTGGGGGCA TGGGCGGACA TCGACGATCA TGACGACGAG GATGCCGAGC GAATGGACCA AGCGGAACGC GCGCTGGCGT TCCTGTCTGA GCGTGGCGTG GTGCCAAGCG CAGTTGTGAA GTCTGGCGGT GGGCGCGGGC GGCACGTCTA TTTCAAGTTC ACGTGCTCGG TCGACGGGAC GACGGGTAAG CGGATCGCCG CGAAACTGGC GAAACTGCTG GGGAGCGACC CCAACGTAGC CGACGCGGCG CGCGTGATGC GGATCCCAGG CTCGATGCAC ACGAAATCTG GACGGATTGT GAAAGTCTCG ATTGAGAGCT GGCACAAAGA GGCGCACTAC AACCCCGAGG CGTTTGAGGC GGCCATCGAT GAGATTGCCC ATGCGCTAGG GATTGACGTG TCCAGAACGG AGCCCTTTTT GACGCCGCGT GAAAATGTAG AGTGCATGGG GGATTGGAAA CCTGTCCCCG CGGAGTTTGT CGAAGAACAA CTTCCGACCA TCTGCGCAAG GTTCAAGGCT TATGTGCAGG ATCCCAACAT CGTAAGCGAA CCCGTTTGGC ACAAAATGGC GTCGCTCTTG AAAGCTATGA ATCCAGACTC TTCCCTCTTT CACAAATGGT CGGAAGGGTA TGACGCAGGG CCGGGCAAGA GATACAACTG GGGCGAAGCG GAGAGAAAGT TCCGTTCATC GCGACCGCTG GCTGTACGGT GTTCGACGTT TCAGGAACTC GATCCGATGA GCGTTTGCGC AGCATGCAGG CATTTTCAGA GGGGATCCAG TCCGGCAACG TTTGTCCGCA GGGCTTACGC GGCGCAATTG GGCCTCCCGG GGCTCTACGG CGCTCCAGAT CAACCCGAAG GGCCGAAAAT GGACGGGCTT CCGACGCAAA CGACAGAAGA GGCGCTATAT GCAAATGAAG GGACTCGCAT TGCCGCAGGC GCAGAAGACA TTGATCCCCG AGAGGTGATC GTGAACGAGC CCATTGCTTG GACGGAGGAT CTGAGCGACG CCCTGGAAGA GCAGATTGAT TGGAGTGAGA GGCCGTTTAC GAACGAAACA GCTCGGCAAT GGGCAAAAGC AAGGAAGAAA CGCTTCGTCT ATACCGACGA AGAAAAAGGA AAGGAGCATT TGCTGCTGCG CCCAATGGCA ACGGCCATCA AGGAGGATTT CAATCTTCAG TACTTCTTCC AGACCTGTTA CTACTATGAC GGTTCAATTT ATACCACGCC TACCGACGAC GGGGCGGACG AAGCGGTCAT CCGAGATTTC ATCCTCGAAG CTCTGGAAAC CTTGAAGCCG ACCTGGGCTA CGTGGTCACG CGCGGAAGAG ATCAAGCGGA TGCTCATCAA CAACGTCCAG CGCGACAAAA ACCATTCCGT CGAATCCATT CGGGTGCATG AGGTTTGGAA CACCGAGCCG TTGGTCCCGT TCGTGAACGG ACTGCTGGAC ATGAGCGATC CGTTTGACCA TGATTGGCGA GTCTATGATT TCTCGCCAAG GCATCGGATT AACTGGAAGC TGACGATCCC GTTCTTTGAA AACTGGTATC GAACACCTAA GTCATGGACG CTTGCCATGA AGGATGCGGA AGTCGATGTG TTGGACTTTT TCAGGACGAC ATTTCCTGAC GACGAGACCC GACGTTCGAT CCTGGAATTT CTCGGCTATT GTCTGTGTCG GTGGGATCAG TCCGAAGAAT GTTACGCCAT CCTCTATGGG CCAGGGCAAA ACGGTAAGTC GACGCTCTTA GGTATGCTTG CGAAGGCTTT TGGAATTTAC GCAGTGACGG AAAGTGTACA GAGCCTTGAG CGTAACCGAT TTGCCTCTGC GAGTCTGACT CGCGCCGCCA TCGACATCGT GCCGGATATG GCGGGCACGG GAATCGAGGA CACGAGTTTT CTCAAGGGTT GGATTGGCAA TGACGTGGTT CGGGCTGAAC GCAAGTTCAA GGCGTCATTC GAGTTCAAGC CGCAGACGAA GCTAATTTAT GGTGCGAACG AGTTACCGCC CACAAAGGAC CCGACGCATG GTTACTTCCG ACGGATCCTT CTGTATCCCA TGATGGAACG CTTTAAGCGG CAAGGGCCGG GATGGGTGGA ACGGCTGAGG ACTCCCGAAG CGCTGTCGTA CATGTGCTAT CTCGGGTTGC TGCATTATCG TCAGATGCGA CGTGAAGGCC GCAACATCAC AGAGTCCAAA GAGATGCTTC GTGAGAAGGA CTACTATTGG CGTGCGAACG ATGTGGTAAA AGCGGCCATA GACGAAGGAA TCATCGAGTT CGGTAAAGAG TTCAGTGTAC CGCGCGATCT GCTTCAGAAA GCAATGGAGA TTTACGCGAA GGAGACAGGT CGCAAATATC CTGGAGCGGC AAAGTTGCTG GAGCGCCTGC GAAATTACGC ACCGCACAAG ATTGAATATT CTCGACCCCG AAGGAATGGT AAACGAATCC ACATGTGGAC TGGGGTTACG TTGGGAGAAG CCGGACGATC ATTGTTCGTC AGTCGGGAGA TTGTGGATTT GGATCGCAGG ACGTTGGAGT ACATCACTTT GCCGGTTACG GATGCGTATG CAAAGGAACG CAATTTAGAC AATGTTGAGA TGCTGGAATC CGGGACGCTA CCGAAAGATG ACTCTCAGTG A
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Protein sequence | MSRDCKLCNS PIREEIETRW LAGESYRELE ARCVELGEEI SDSGIRRHMI EHAFCGDPAE SVDFLRWWFE GAAGYVEIRP IPNRKDDREM AFKAVKARRS FATTDFEALR DYFGRGYQST DMARCGWYFG VCLRDKPVQR TEDGRWSGGS AEDVVACLGA WADIDDHDDE DAERMDQAER ALAFLSERGV VPSAVVKSGG GRGRHVYFKF TCSVDGTTGK RIAAKLAKLL GSDPNVADAA RVMRIPGSMH TKSGRIVKVS IESWHKEAHY NPEAFEAAID EIAHALGIDV SRTEPFLTPR ENVECMGDWK PVPAEFVEEQ LPTICARFKA YVQDPNIVSE PVWHKMASLL KAMNPDSSLF HKWSEGYDAG PGKRYNWGEA ERKFRSSRPL AVRCSTFQEL DPMSVCAACR HFQRGSSPAT FVRRAYAAQL GLPGLYGAPD QPEGPKMDGL PTQTTEEALY ANEGTRIAAG AEDIDPREVI VNEPIAWTED LSDALEEQID WSERPFTNET ARQWAKARKK RFVYTDEEKG KEHLLLRPMA TAIKEDFNLQ YFFQTCYYYD GSIYTTPTDD GADEAVIRDF ILEALETLKP TWATWSRAEE IKRMLINNVQ RDKNHSVESI RVHEVWNTEP LVPFVNGLLD MSDPFDHDWR VYDFSPRHRI NWKLTIPFFE NWYRTPKSWT LAMKDAEVDV LDFFRTTFPD DETRRSILEF LGYCLCRWDQ SEECYAILYG PGQNGKSTLL GMLAKAFGIY AVTESVQSLE RNRFASASLT RAAIDIVPDM AGTGIEDTSF LKGWIGNDVV RAERKFKASF EFKPQTKLIY GANELPPTKD PTHGYFRRIL LYPMMERFKR QGPGWVERLR TPEALSYMCY LGLLHYRQMR REGRNITESK EMLREKDYYW RANDVVKAAI DEGIIEFGKE FSVPRDLLQK AMEIYAKETG RKYPGAAKLL ERLRNYAPHK IEYSRPRRNG KRIHMWTGVT LGEAGRSLFV SREIVDLDRR TLEYITLPVT DAYAKERNLD NVEMLESGTL PKDDSQ
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