Gene Aaci_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1053 
Symbol 
ID8424545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1118216 
End bp1119448 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content59% 
IMG OID645027164 
ProductIntegrase catalytic region 
Protein accessionYP_003184480 
Protein GI258511046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.56541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGT CTCTTGGTTC TCGCCGCGAA TATCTTGGGG TCATGCGCGC CCGATACGCA 
GAGGCGAAAT CTAGACGCGA AAAATCGCGG ATTCTCGATG AGATTCAGTC CGCGCTCGGC 
TATGCCCGGA AACATGCCAT TGCCGTGATG CATCCGAAGC CGCCGCGCTG TGCCAAACCA 
CGCAAACCGC GGCCACAGCG CTACCAAGCA GCCATGCCCG TCATTCAACT CGTCTGGGAA 
GCTCTTGATT ACCCCTGCGC TGAACGGCTC CACCCCGTGC TCCTCTCGAC AGCGCAACAA 
CTCGCTCACC ATGGCGAACT TCGTCTTACG GCCGAAATCG AGCATGACTT GCAAAACATC 
AGTCGTGCCA CACTCGCTCG GCGCATCTCA CGATGGCAAC GCCCAAGCGC GCGGCGCGTA 
CCCACAGGCC GTCGACTGGC TTCCAGGTTG CGGAGTGAAA TCCCTGTGCA ATCCTACGCT 
TGGAACGAAG AACGGCCCGG CGCGTTGGAA ATTGACCTGG TTCAACATGA CGGTGGCTCC 
GCCTTGGGGC ACTTTGCCTA CACGCTTTCT GTCGTGGATG TGGTCACGGG ATACAGTCGG 
CGCCGAGCTG TACTCGGTCG TGGTCAACCC GGCGTTCTCG ACGCGCTCCG TCGCATCGTC 
GAGGAGTGGC CATACCCTGT CTGGGCCATT CATTCGGACA ACGGCTCCGA GTTCATCAAT 
GGACACCTTC AGGCGTTCGT CCGTGAGCGA GGTCTTCAGT ACACCCGTAG CCGCCCTTAC 
CAGAAGAACG ACAATCCGCA TGTCGAGCAG AAAAACCGCT TCCTGGTGCG CGAGGTCGTG 
GGCTACAGTC GATACGACAC GCCTCAGGAT GTGACGTGGC TGAACACCGT GTACCAATGG 
CTCGACGTCT ATGCGAACGC CTGCTTGCCC ATGCGAAAAC TCATCCAGAA AACGCGCGAA 
GAAGGGCGCG TGCGCAAGCG ATACGATCAA GCGGAAACAC CCGTGCAACG CATGCTGAAC 
GCCAGGATTT TACCAGCATC TTCCCACGCG GCCTGGGAGC GCTGGATTCT TTCGCTCAAT 
CCGCTGCAAA TGCATCGTCA GCTGGAAACC CTCGTTGCGC AGGGCTCAAG CGGCGAGTCG 
ATTACTCCGG ACCCTCCGAC TCCACCCAGC ACTACGGCCT GTGGATTTGA TGGACAACCC 
TGCGGGTTGA CCACAACTCC ACAGGCTCGA TGA
 
Protein sequence
MEMSLGSRRE YLGVMRARYA EAKSRREKSR ILDEIQSALG YARKHAIAVM HPKPPRCAKP 
RKPRPQRYQA AMPVIQLVWE ALDYPCAERL HPVLLSTAQQ LAHHGELRLT AEIEHDLQNI 
SRATLARRIS RWQRPSARRV PTGRRLASRL RSEIPVQSYA WNEERPGALE IDLVQHDGGS 
ALGHFAYTLS VVDVVTGYSR RRAVLGRGQP GVLDALRRIV EEWPYPVWAI HSDNGSEFIN 
GHLQAFVRER GLQYTRSRPY QKNDNPHVEQ KNRFLVREVV GYSRYDTPQD VTWLNTVYQW 
LDVYANACLP MRKLIQKTRE EGRVRKRYDQ AETPVQRMLN ARILPASSHA AWERWILSLN 
PLQMHRQLET LVAQGSSGES ITPDPPTPPS TTACGFDGQP CGLTTTPQAR