Gene Aaci_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1029 
Symbol 
ID8424521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1098669 
End bp1099262 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content64% 
IMG OID645027140 
Product2'-5' RNA ligase 
Protein accessionYP_003184456 
Protein GI258511022 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAC GCCTGTTCTT CGGGCTCGAA CTTCCCGACG CTTGGAAGGA CGAGATCGCG 
AAGCGGTGTG AGTCCATTCG ACAGCAGGGT CAGGTCGTCG CGCGCAATTG GTCGCGCAAA 
GATCTGTATC ACCTGACCGT GCTGTTTCTC GGCGCCGTCG ATCCGGCCGA CCTCGAGCGT 
GCCTTCTTGG CGGGAGAGCG AGCCGCCGGC GCGCAGGCGC CGTTCCGGCT CACCACCGGC 
TCGTTCGGCA GGTTCCATCA GAGCCGCGTC TTCTGGCTCG GGCTCGACGA GGCCGAATCC 
GATCTCGCCG AGCTCACCGC ACTCCACCGT TGCGTGCGAA TCGCCGTCAA CGCGGCACTG 
CCGAGTGTGC AGATCGAAGA TCGGCCTTAT CGGCCTCATA TCACGCTCGC CCGTGAGCTT 
CGCCAGTTTT CAGAGCCCGA ACTCGTCGCG CCGAGGCCCT TGAGCCACGT GTTCACGGAG 
TTGTGTCTCT TCGAGTCCAC TCGAAACGGC GGTCAACTCG CCTATCCTGT CATCCGGCGC 
TTCCCATTTT CCGGCGCCTC CGCGACTCAT ACGCCAGAAG GCCCAGCGCG TTGA
 
Protein sequence
MKRRLFFGLE LPDAWKDEIA KRCESIRQQG QVVARNWSRK DLYHLTVLFL GAVDPADLER 
AFLAGERAAG AQAPFRLTTG SFGRFHQSRV FWLGLDEAES DLAELTALHR CVRIAVNAAL 
PSVQIEDRPY RPHITLAREL RQFSEPELVA PRPLSHVFTE LCLFESTRNG GQLAYPVIRR 
FPFSGASATH TPEGPAR