| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3290 |
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| Symbol | hypD-2 |
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| ID | 7137024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2964574 |
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| End bp | 2965686 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643531633 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_002427643 |
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| Protein GI | 218666603 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.138162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATATG TCGACGAGTT CCGTGACGCC ACCTTGGGCC GCGGTCTGGC GCGCGCCATC
GCCGCCGAGG TATCTTCCCA CCGGGACTAT CATCTGATGG AGTTTTGCGG GGGCCACACC
CATGCCATAG CCCGCCATGG CATCCCAGAC CTCCTGCCGG CCAATGTCCA CCTGATCCAC
GGACCCGGGT GCCCGGTCTG CGTCCTGCCC ATCGGCCGCA TCGACAGCGC CATCGCCCTG
GCGCTGGATC ATGGCGTCAT CCTCTGCACC TACGGCGATG TGCTGCGCGT CCCGGCATCG
GAACGCCGGA GCCTGCTCCA GGCTCGCGCC GCCGGAGCCG ATGTCCGCAT GGTCTATTCC
AGCCTGGATG CCCTGCGCAT CGCGCGGGAA AATCCGGATC GGGAGGTGGT CTTCTTCGCC
ATCGGGTTCG AGACGACCAC CCCGCCCACC GCCGCGGTCC TCCGCCAGGC CAAAGCCACG
GAGGTCAAAA ACTTCACGGC ATTCTGCAAC CACGTGCTGA CCCCTGCCGC CATCCGCGGC
ATCCTGGATT CGACCGCGCC AGAGGGCACG CGGCTGGACG GCATCATCGG GCCGTCCCAT
GTCAGCACCG TGATCGGCAG CCGACCCTAT GAGTTTGTCG CGGAGGAGTA TCATCGGCCG
GTGGTGATCG CGGGCTTCGA GCCTCTGGAT GTGATGCAGT CCATCCTCAT GCTGATCCGC
CAGATCAATG CCGGACAGGC GGAAGTGGAG AACGAATTCA CCCGCGCCGT GCGTCGCGAC
GGCAACCCCA AGGCCCAGTC GCTGATAGCC GAGATCCTGG AACCGCGGCC CGCCTTCGAG
TGGCGTGGCC TCGGCAGCAT CCCCCGCAGC GCACTGCGCA TCAACGCCGC CTACGGCGAC
TTCGACACCG AGCGCCGTTT TTCCATCCCT TACCGGGCGG TGGCCGACCA TAAGGGCTGC
GAGTGTGGCG CCATTCTGCG CGGCACCAAG GAGCCCCGAG ACTGCCGACT CTTCGGCACC
GCCTGCACGC CCGAAAACCC TGTGGGTTCC TGCATGGTCT CCTCGGAGGG TGCCTGCGCC
GCCCACTACA CCTATGGTCG CCATCGGGAT TAG
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| Protein sequence | MKYVDEFRDA TLGRGLARAI AAEVSSHRDY HLMEFCGGHT HAIARHGIPD LLPANVHLIH
GPGCPVCVLP IGRIDSAIAL ALDHGVILCT YGDVLRVPAS ERRSLLQARA AGADVRMVYS
SLDALRIARE NPDREVVFFA IGFETTTPPT AAVLRQAKAT EVKNFTAFCN HVLTPAAIRG
ILDSTAPEGT RLDGIIGPSH VSTVIGSRPY EFVAEEYHRP VVIAGFEPLD VMQSILMLIR
QINAGQAEVE NEFTRAVRRD GNPKAQSLIA EILEPRPAFE WRGLGSIPRS ALRINAAYGD
FDTERRFSIP YRAVADHKGC ECGAILRGTK EPRDCRLFGT ACTPENPVGS CMVSSEGACA
AHYTYGRHRD
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