Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2564 |
Symbol | |
ID | 7136797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2278728 |
End bp | 2279204 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643530920 |
Product | rod shape-determining protein MreD, putative |
Protein accession | YP_002426944 |
Protein GI | 218666662 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGCCG TCGTAGTCGT TCTCGGTTTT TTCTTCGCGC TCGTGGCGGA AGCCATTCCC TGCGGTCCGT TTTACGCATC GCTCCACCCG GATTTTGTAG CCCTGCTACT GCTCTATTGG GCCATCAGCA GTGCTTCTGA ACTGAGCTTT ACCGTGGTCT GGCTGATCGG GCTACTTCAG GATATGGTAC TTGGCGATGT GCTGGGAGCC CAGGCTATCG CCGGGGTCGT CATGATTTAT CTGCTCTACA CCGGCATTGC CAGGGTTCGC AGTCTGGCGT CCTGGGAGCA ACTCTTCTTC ATATTCATGT TGCTGCTGGC CCACCGGTTG CTGGTCTGGT CGTGGCAGGC CTGGGCAGGC ACCATCACAT GGCATTTTTC GCTGCTTTTA GGGCCACTGA TCGGCGCCCT GTTGTGGCCG CTTTTTACGT TGACGCTCGA TTATCTGCGT CACGCATTGC GCCTGAACCA TACATGA
|
Protein sequence | MIAVVVVLGF FFALVAEAIP CGPFYASLHP DFVALLLLYW AISSASELSF TVVWLIGLLQ DMVLGDVLGA QAIAGVVMIY LLYTGIARVR SLASWEQLFF IFMLLLAHRL LVWSWQAWAG TITWHFSLLL GPLIGALLWP LFTLTLDYLR HALRLNHT
|
| |