Gene AFE_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1326 
Symbol 
ID7135789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp1145997 
End bp1146689 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content55% 
IMG OID643529722 
Producthypothetical protein 
Protein accessionYP_002425762 
Protein GI218667080 
COG category[K] Transcription 
COG ID[COG3561] Phage anti-repressor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.18998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGTA ATCCCTTGGT GATTACCGAG AAAGCGGTTG GTCGCCGCAG CGAAAAGACC 
GTGAACGCTC GCGACCTGCA TGCATTCCTG GAGGTCGGGC GTGACTTTAC GAACTGGATC 
AAAAACCGGA TCAAACAGTG GGGATTTGTG GAGGGGAAGG ATTACATTCG CCTTGAAGGT 
TTGATCTCCC CCATTTTGGC GAGCAAAGGC CGGAAAGAAA ATGTTTGCTC GCCCGTTTTG 
GCGAGCAAAG GTCGTGGTGG ACATAATGTC ACGGAATACG CCCTGACCCT CGACATGGCC 
AAGCACCTGT CGATGATCGA GCGGTCACGG AGGGGACACG AAGCCCGCGA ATACTTTATC 
GAATGCGAGC GCCGGTACCG TGGGCTCAGG GAGCAAACCG CGCCGGTTCC GCCGGATACC 
ACCAGGACCC CGGAAGAGTT GGCCTCACTG TTGCACTTGT ACGCGGCGTC CGTGAAGGCC 
CACAAAGCCA ATGGCTTAAA TCAGTTCCAG GCCGTGCTGG GCGCGCGTCG GGTGCTGCTG 
AAACAGTATC AGTTCGATAT TAATCATCAT TTGATTCTGA ATGATGTGGA GTATTTGGCA 
CGGGTCGGGA TGGTGTCGAA CGAGCGCGAG AAACAAGATC GCCGTTTCTG GTTTCCCGAC 
GAGATTGATG ATGGTCCGAA CACCACTCAC TAA
 
Protein sequence
MERNPLVITE KAVGRRSEKT VNARDLHAFL EVGRDFTNWI KNRIKQWGFV EGKDYIRLEG 
LISPILASKG RKENVCSPVL ASKGRGGHNV TEYALTLDMA KHLSMIERSR RGHEAREYFI 
ECERRYRGLR EQTAPVPPDT TRTPEELASL LHLYAASVKA HKANGLNQFQ AVLGARRVLL 
KQYQFDINHH LILNDVEYLA RVGMVSNERE KQDRRFWFPD EIDDGPNTTH