Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1296 |
Symbol | |
ID | 7134092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1129497 |
End bp | 1130459 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643529692 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002425732 |
Protein GI | 218667331 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.842409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGC AACAGCTTCG TTTCATCTGC GCGGTGGTGC GCCAGAACTT CAATGCGTCG GCCGCCGCCG ATAGCCTGTA TACCTCACAA CCGGGGGTGA GCAAACAGAT CCAACTCCTC GAAGAGGAGA TCAATGTGGC GCTTTTCGTG CGCAAAGGGA AGCGCATCAT CGGAATGACC CCGGCGGGTG AGCAGATATT CACTTTTGCA CAGCGGGTAG TCGGCGATAT CGAGAATATC CGAAAAGTAG GTCAGGAGTT TTCTCAGGGC GATCGTGGGG AATTTGTGAT CGCCACCACC CATACTCAAG CCCGATACAG CTTGCCCAGG GCGATAAAGA CCTTTACGGA ACGCTACCCA GGGGTTCAGT TGCGCCTGCG CCAGGGCAAT CCTACCCAGG TCGCGGAGAT GCTTGCGGCG GGGGAGGCAG ACGTGGCGGT CGCAACGGAG TCGTTGAATT CCTACGCGGG CCTTGTCGCC CTGCCCTGCT ATCAGTGGAA TCGCGTCGTT ATCACACCCA CCGGCCATCC GCTGCTGCAA AGCCAGCCAC TGACGCTGGA AGCAGTCGCC GCCCATCCCA TAGTAACCTA CGACCAGGCC TTTGCAGGGC GCTCCCTGAT CGACAAGACT TTCGCCAATC ACGGCCTGTC CCCCAACATC GTGCTTTCCG CCATAGACTC CGATGTCATC AAGGCGTATG TGGAACTGGG GTTGGGGATA GGCATCGTCG CCCAAATGGC TTATGACCCT GTACGGGACA CAAAACTGGA GGTGATCGAT GCGAGTCACC TGTTCGATCC CAGCACCACC TACCTGGCCT TGAGGCAGGG AACCTATTTA CGCGGGTATC TATACACCTT CATAGCGTTA TACGCGCCAC ACCTCGATCG CAACACGGTG GATCAGGCCC TGGATTCCAC AGTTGCTTCC AGGGCGTTAT TGGCGCCAGG TGGTAGCGCC TGA
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Protein sequence | MNLQQLRFIC AVVRQNFNAS AAADSLYTSQ PGVSKQIQLL EEEINVALFV RKGKRIIGMT PAGEQIFTFA QRVVGDIENI RKVGQEFSQG DRGEFVIATT HTQARYSLPR AIKTFTERYP GVQLRLRQGN PTQVAEMLAA GEADVAVATE SLNSYAGLVA LPCYQWNRVV ITPTGHPLLQ SQPLTLEAVA AHPIVTYDQA FAGRSLIDKT FANHGLSPNI VLSAIDSDVI KAYVELGLGI GIVAQMAYDP VRDTKLEVID ASHLFDPSTT YLALRQGTYL RGYLYTFIAL YAPHLDRNTV DQALDSTVAS RALLAPGGSA
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