| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1199 |
|---|
| Symbol | rnhA-1 |
|---|
| ID | 7136929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 1037913 |
|---|
| End bp | 1038350 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643529596 |
|---|
| Product | ribonuclease HI |
|---|
| Protein accession | YP_002425636 |
|---|
| Protein GI | 218667057 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0328] Ribonuclease HI |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0115399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAT GGAAAATCTG GTGTGACGGA GCCTGCGCGC CGACCAATCC CGGCCCTTGC
GCCTGGGGTG CCGTGATCGA GTCTCCAGAT GGGGGGCGCA TGGAACATTG CGGCTTCATC
CAGCCCATGG GGACCAACAA CATCGCCGAG CTGACTGCGG CCATCGAATC GCTGCGCAAG
GTCCCCGCCG GCGCCCAGGT GGTGCTCTGT TCCGACAGCC AGTACACGCT GAAAGGTCTG
GGGGAATGGC TCCCGGGATG GATCCGAAAG GGCTGGCGCA CGGCATCCGG ATCGCCGGTG
CTTAACAAGG AACTCTGGCA GGCACTCCAC CAGGAATACG CGGCCCGCAA GGTGAAGCTG
GAGTGGGTCC GTGGCCACAA TGGGCACCCG GAGAACGAAT TGGCGGATCG GTTGGCGAAC
AGGGGGCTGC GTAGATGA
|
|---|
| Protein sequence | MSQWKIWCDG ACAPTNPGPC AWGAVIESPD GGRMEHCGFI QPMGTNNIAE LTAAIESLRK
VPAGAQVVLC SDSQYTLKGL GEWLPGWIRK GWRTASGSPV LNKELWQALH QEYAARKVKL
EWVRGHNGHP ENELADRLAN RGLRR
|
|---|
| |