| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1007 |
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| Symbol | |
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| ID | 7136980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 917483 |
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| End bp | 918112 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643529405 |
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| Product | transglycosylase, putative |
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| Protein accession | YP_002425480 |
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| Protein GI | 218665384 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.232372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGTC GCTTGCCCGC CGTGGTTCGA AGGAATGTCC TTGCGACGTT ACCCATCATC
GGATTGGGAT TCACCGTGTT GGCTGGCGCC CATGGCTCCG GATTGCCCCA TCCGGTTCGC
TCTGTTGCGG CCACTCAGGT TGCCGATCCA TTGCGAAGCT GCGTGAATCC GATCTACGCA
CGCGATAAAA ACGCTTTCAC CCATTTGGCC CGTCATCTGC GTCAGCGTAA AAACCAAGTG
CGCCGGTTGG CCGGGCCTTA TGCCGGCATG GTGTTACGAG CCGCCAGGCG GGCGCATGTG
CCAGCGCGGC TGGTGGCAGC GGTGGTGCGG GTGGAGAACG GCGGCGACTT CCACGGGGCG
GCCACGCGGG TTTCTTCCGC CGGCGCCATC GGCGTCATGC AACTGGAGCC AGCGACAGCT
TGGGACACCT TGCGGGTCAA TCCCTGGAAC CCCCGCCAGA ACATTGAGGG TGGTGCCCGA
TTTCTGGCGC TGCTGCTGCG GGAGTTCGGC GGTAATGTGC GGCTGGCGCT GATGGCTTAC
AACGCCGGTC CAACCTGGAT CGCGCAGGGT GGCCGACCGG AACAGGCGGT GATCTATGCC
AATGAGGTCC TGGCTTATGC TTACGCCTGA
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| Protein sequence | MISRLPAVVR RNVLATLPII GLGFTVLAGA HGSGLPHPVR SVAATQVADP LRSCVNPIYA
RDKNAFTHLA RHLRQRKNQV RRLAGPYAGM VLRAARRAHV PARLVAAVVR VENGGDFHGA
ATRVSSAGAI GVMQLEPATA WDTLRVNPWN PRQNIEGGAR FLALLLREFG GNVRLALMAY
NAGPTWIAQG GRPEQAVIYA NEVLAYAYA
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