Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0439 |
Symbol | |
ID | 7137044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 380607 |
End bp | 382193 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643528850 |
Product | amino acid permease family protein |
Protein accession | YP_002424935 |
Protein GI | 218665817 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGGA AGCTAAAGAG AGAGGTAGGA TTTTCAGGGC TCATTTTCGC CAGTCTGGGA GGAATCATCG GTTCCGGCTG GCTATTTGGT CCGCTGGCTG CAGCGCAGGT GGCCGGACCC CTCAGTATTT ATTCATGGCT GATTGGCGCC ATCACCATTT TGTTTCTCGG CCTGACTTAT GCCGAGGTCG GACCTTTATT TCCAAAGGCA GGTGCCGCGA CACATATTGC CAACGTAGTA CATGGCAATC TGCTCGGTAA GATCTGGGCA TGGCTATTGT TTATGTTCTA TATCGCTATT GCTCCAGTGG AAGTGGTCGC CGTACTGACC TATGCCAACA ATTATATTCC CGGACTGCTG GCAGGCGACA CCGGCCTGCT GAGCGGTCCG GGACTCATCA GCTCCGTAGT GCTTCTGGGG TTCATGTTCC TGCTCAATTT TTTAGGTATT CGCCGGATAG CCAACATTTT TACCGGACTG GGCTGGTGGA AACTGGCCGT GCCCGTCCTT ACCATGATCG TCCTTGTCGC ATTCTCCTAT CATCCCGAAA ATTTGCATGT CCTTCACTGG CATGAAAACG TGCATGGCAT GTTCGTTGCC GTCGCATCAT CGGGCATTGT CTTCAGCTAC CTGGGTTTTC GACAGGCGAT CGAACTGGGT GGTGAAAGCC GCGAACCTGG CAAACATATC CCTCTGGCGG TAATTGGTGC CATCGTGATC GGGGCGATCA TTTACGTCGG TCTGCAATGG GCCTTTTTGG TCAGCGTGCC CCCGTCACAA CTGACCCAAG GCTGGACCAA ACTGAGTTTT TCCGGGGTAT TTGGTCCTTT TGCCGCCATT GCCTCTCTTT TGGGAATAGG CTGGCTGGCT GTCCTGATTT ATGCCGACGC GTTGATCTCT CCGGGAGGCA CCGCTCTGGT ATATGCCACA TCTGCGGCCC GCGCCGTGGT CGCCAATGGC GAAGTCGGGG CAGGCCCCAG CTTCTTTACC CGGATCACCG AAGGGGGGGT ACCCTGGGTG GGGATCATCG TCGCCTATGT GATCGGGTGC ATCTACTTCC TACCCTTTCC TTCCTGGCAG AAACTAGTGG GTTTTATCAC TACCATCTCG GTGATCACCT ACGGTATCGG ACCTATCGTC CTACTGCAAT TGCGCCGTTC CATGCCTGAG CTGGAAAGAC CTTTCCGCTT GTGGGGCGCG CAGATCATCG CGCCCATTGC GTTTATCCTT TCTTCACTCG TGGCCTACTG GGGCGGTTTC AAGGCGCTGA CTTACATCTT CGGCACGCTG TTCGCCATCC TGATCCTATA TGGCATCGTA TACAGGATTC GCGGCAGCCG TGATGGCACT CCCTTGGGGT TCAAGCATAT CACCTGGATA TTCCCTTATT TTTTGGGGCT CTGGGTGCTT TCCTGGTTTG GACCCAAGGT ATTGGGGGGC CAGGGAGTCA TTCCCTTTTA CGGGTCCATG GCGGCCGTTG CAGTGCTGGC GCTCATCTCC ATGGTCTGGG CGTTGAAGGT GACGGTGCCC GACAGCCAGA TATCCGAGTA TTTCTCGGTC ATGAACAAAG AAGGAGTGGA ACTGTAG
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Protein sequence | MAGKLKREVG FSGLIFASLG GIIGSGWLFG PLAAAQVAGP LSIYSWLIGA ITILFLGLTY AEVGPLFPKA GAATHIANVV HGNLLGKIWA WLLFMFYIAI APVEVVAVLT YANNYIPGLL AGDTGLLSGP GLISSVVLLG FMFLLNFLGI RRIANIFTGL GWWKLAVPVL TMIVLVAFSY HPENLHVLHW HENVHGMFVA VASSGIVFSY LGFRQAIELG GESREPGKHI PLAVIGAIVI GAIIYVGLQW AFLVSVPPSQ LTQGWTKLSF SGVFGPFAAI ASLLGIGWLA VLIYADALIS PGGTALVYAT SAARAVVANG EVGAGPSFFT RITEGGVPWV GIIVAYVIGC IYFLPFPSWQ KLVGFITTIS VITYGIGPIV LLQLRRSMPE LERPFRLWGA QIIAPIAFIL SSLVAYWGGF KALTYIFGTL FAILILYGIV YRIRGSRDGT PLGFKHITWI FPYFLGLWVL SWFGPKVLGG QGVIPFYGSM AAVAVLALIS MVWALKVTVP DSQISEYFSV MNKEGVEL
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