| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0228 |
|---|
| Symbol | |
|---|
| ID | 7135243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 204665 |
|---|
| End bp | 205627 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643528640 |
|---|
| Product | glycosyl transferase, group 2 family protein |
|---|
| Protein accession | YP_002424735 |
|---|
| Protein GI | 218665465 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.421511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGG TTTCCGTCGT GATCCCGCTC TACAACGAGA TCGACAATGT CTCACCGCTT
TGTGCGGCCC TCGGCAACGC CCTGGGAGAC ACCGACGCCG AAGTGATCGT CGTCGATGAC
GGCAGCCGGG ACGGGAGTGC CGCCGCGCTG GACCGGGAGG CGGAGGCGCG CGGCCCGCGT
TTCAAGGTCA TCCACTTGCA ACGGAATTTC GGGCAGACAG CGGCGATGCA GGCGGGGATC
GACGCTGCCC TGGGCGAGGT GATCGTGACC CTGGATGCGG ATCTGCAAAA TGATCCGGAA
GATATCCTGC CTCTGGCGCG GCGTCTGCTG GAGGAGAATC TGGACGTGGT GGCCGGCTGG
CGGAAAAACC GGCAGGATGG TCTGTTGTTG CGCAAGATTC CGTCGCGGAT TGCCAATCGT
CTGATCCGCC GCCTCACCGG GGTTTATCTG CACGATTATG GCTGTACCCT CAAAGCCTAT
CGGGCCTCGG TGATCAAGGG GGTGCGCCTG TATGGCGAAA TGCATCGCTT TATCCCGGCC
TGGCTTTCCA CCCTGACTTA TACGGATCGC ATCGTCGAGG TGCCGGTACG GCACCATCCG
CGCCGGGCGG GGCACAGCAA ATACGGCATC ACCCGTACCT TCCGGGTGCT GGTGGATCTG
CTCTTCGTCA AGTTTTTCCT GGGCTATAGT CAGCGGCCCA TGCATTTTTT CGGGGTGATC
GGATTGATCC TCCTGAGCAG CGGTTCGGCC ATGCTGCTGT ATCTTTTTGT GGATAAATTT
GGCTATGGCG CTACGATTTC CGGACGCCCC ATGCTGATTG CCGGTGTGCT GTTTTTCCTT
GCCGGGTTGC AATTCCTCAA TACCGGCATC CTCGGCGAGA TGCTGGTGCG CGTCTACCAT
GAGTCTCAGG ATAAAAAGAC TTATGTGGTC CGCCATACCG TACATCTCGA TCCGCCCGCG
TGA
|
|---|
| Protein sequence | MALVSVVIPL YNEIDNVSPL CAALGNALGD TDAEVIVVDD GSRDGSAAAL DREAEARGPR
FKVIHLQRNF GQTAAMQAGI DAALGEVIVT LDADLQNDPE DILPLARRLL EENLDVVAGW
RKNRQDGLLL RKIPSRIANR LIRRLTGVYL HDYGCTLKAY RASVIKGVRL YGEMHRFIPA
WLSTLTYTDR IVEVPVRHHP RRAGHSKYGI TRTFRVLVDL LFVKFFLGYS QRPMHFFGVI
GLILLSSGSA MLLYLFVDKF GYGATISGRP MLIAGVLFFL AGLQFLNTGI LGEMLVRVYH
ESQDKKTYVV RHTVHLDPPA
|
|---|
| |