| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0128 |
|---|
| Symbol | |
|---|
| ID | 7134498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 117222 |
|---|
| End bp | 117614 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643528542 |
|---|
| Product | NifU domain protein |
|---|
| Protein accession | YP_002424638 |
|---|
| Protein GI | 218667291 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0694] Thioredoxin-like proteins and domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.202734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGGCCA TGCGCTCAAC CGTAAAATCC CCCATCCGCT TTTACAGCGA AGAAGAACTG
GACGCCCTGG AGGCGGAAGA CCCCCTCGCC GCGGCCAAAA TCGCCCACGC CCAGGCCATG
GCCGAACGCG GACTCGACCG CCAGAAACGC TACGGTCCCG ACGACCCCCT GCCCGACCCT
GCGGCTGTGG CAGAGGCGGT GCAGACGGTA CGCCATATCC TCCACCGCGA TGGCGGCGAT
ATCGAACTGG TGGAAATCAT CGAACGCGAC GTGCGGGTCC GCATGAAAGG CGCCTGCGCC
GGCTGCCCCA ACGCCGTCAT CGATCTCAAA CAGGTGGTCG AGCGTATCGT CGGCGCCGTT
CCGGGCGTGG TCAACGTGAG CAATACCTTT TGA
|
|---|
| Protein sequence | MTAMRSTVKS PIRFYSEEEL DALEAEDPLA AAKIAHAQAM AERGLDRQKR YGPDDPLPDP
AAVAEAVQTV RHILHRDGGD IELVEIIERD VRVRMKGACA GCPNAVIDLK QVVERIVGAV
PGVVNVSNTF
|
|---|
| |