Gene A2cp1_3588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3588 
Symbol 
ID7298710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand- 
Start bp4006723 
End bp4007697 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content79% 
IMG OID643596401 
Producthistone deacetylase superfamily 
Protein accessionYP_002493984 
Protein GI220918680 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.503962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCGGC GCGTCCTCCT CGTCTCACAC CCCGACTGCC AGGCCCACGA TCCCGGCCCC 
GGACACCCGG AGCGCCTGGC GCGGCTCGAG GCCGCGCTGG AGGCGCTCGC GGAGGATGCC 
GCGCTCGGGC CGGACGTGCT GGTGCGCGTC GAGGCGGCGC GGGCGACCGA GCAGGCGCTG 
CTGCGCGTCC ACACCCCCGG GCACCTCGCC CGCGTGCGCG CCCACGTGGA GGCGGCGGCG 
CGCACCCGGA TGCTCGACTG GCTCGAGCCG GAGACGCCGG TGTCGGCGGG CTCCTGGCGC 
GCGGCGGTGG CCGCCGCCGG CGCGGCCATC GAGGCGGCCG AGCGGGTGGC GCGCGGCGAG 
GCGGGGGCGG CGTTCGCGCT GGTCCGGCCG CCGGGCCACC ACGCCTGGGC GGACCGCGGC 
GGCGGGTACT GCCTGCTCAA CAACGTCGCG ATCGCGGCGC GCGCGGTCCA GGCGGCGGGG 
CTGGCGCGGC GGGTGCTCGT GGTGGACTGG GACGTCCACC ACTGCGACGG CACGCAGTCC 
ATCTTCTGGG AGGACCCCGC CGTCTACGTG CTCTCGGTGC ACCTGTGGCC GCACTACCCG 
CACACCGGCG CGCCGGAGGA GCGCGGCGCC GGCGCGGGCG AGGGGACCAC CCGCAACGTG 
GCGGTGCCGC ACGGCACGCG CGCCCCCGAG CAGCGTCGGC TCTTCGAGGA GGGGCTGGCG 
GCGGCGCTCG CCGAGTTCCA GCCGGACCTG GTGCTGCTCT CGGCCGGCTT CGACCCGCTG 
GAGGGCGACC CGGAGGGCGG CCTGCACCTC GAGCCCGCCG ACCTGCACGC GATGACGCGG 
ACGCTGCTGG CGCGGTGCGC CGCCGCGGGC TGCGACCGGA TCGCGGCGGT GCTGGAGGGC 
GGCTACGTCC CGCCGCGGCT GGGCCAGGGC GTGGTGCAGG TGGTGCGGGC GCTGGCGGGG 
CTGCCGGCGG CCTAG
 
Protein sequence
MPRRVLLVSH PDCQAHDPGP GHPERLARLE AALEALAEDA ALGPDVLVRV EAARATEQAL 
LRVHTPGHLA RVRAHVEAAA RTRMLDWLEP ETPVSAGSWR AAVAAAGAAI EAAERVARGE 
AGAAFALVRP PGHHAWADRG GGYCLLNNVA IAARAVQAAG LARRVLVVDW DVHHCDGTQS 
IFWEDPAVYV LSVHLWPHYP HTGAPEERGA GAGEGTTRNV AVPHGTRAPE QRRLFEEGLA 
AALAEFQPDL VLLSAGFDPL EGDPEGGLHL EPADLHAMTR TLLARCAAAG CDRIAAVLEG 
GYVPPRLGQG VVQVVRALAG LPAA