Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3564 |
Symbol | |
ID | 7299614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 3982437 |
End bp | 3984350 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 82% |
IMG OID | 643596377 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002493960 |
Protein GI | 220918656 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0623706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCCCG GTGATCGCCT GGCGCTGGAC CGGCTCTGGC CGATGCTGCT CGGGCTCGCC GCCCTGGTGG CGGGCGCGCT CGCGCTGGAG GCCTGGGCCG GCCGGCGCGG CAACGAGCCG CTCCGCATCG CGGTGGCCGA CGAGGCGGTC CCCGCCGGCG ACGACGAGGA GCCCTCCGGC GACGCGCCCG ACGGACCGGA GGCGCCGCCC GTCTCCGAGG CGCACGCCCG CGCCCGCACC GCGGCGCGCC GCGCGCTCTA CGCGGACGCG ATCCCGCTCT ACGAGCAGGC GCTGCGCGAT CGCCCCGACG CGCCCGCGCT CGAGGCGGAG CTGGGCGCGT GGCTGCTCGC CGCCGGCCAG CCCGAGCGCG CGCTGCCGCA CCTCGCCCGC GCCGACCAGC TCCACCCGGA GCCGGCCACG GCGCTCCGCC TCGGGCTGGC CCGGGCCCGC CTGGGCGATC GCGACGGCGC CGAGCGGGAC CTCCGCCGCG CGCTGGCCCA GCGGCCCTCG TCGGGCGCGG TCCGCATCGC GCTCGGCACG CTGCTGCGCC GGCGCGGCGC GATCGCCGAG GCGGTGGCGC TGCTCGAGCC CGCCGCCGCG GCGGGCTCGA ACGAGGAGCG CGCGCGGGCG CTGGTGGCGC TCGGCGCCGC GCACCTCGCG GCCGGCCGCC GCGCCGAGGC GGGCCGCGCC TTCGAGCAGG CGGTGCTGTA CGCGCCGGCG CGGGTCGAGA TCCGCCTGGG CGTGGCCCGC GCCTGGCTCG GCGGCGACGC CGGCGACGCC GAGCGCGCGC TGTCGGTGCT GGCGCGCGCC GCCGATCTCG CGCCCGACGT GCCGGCGGTG CACGCCGCGC TCGGGCGCGC CCGCGAGCGC ACCGGCGACG ACGCCGGCGC GGCCGAGGCC TACGAGCGCG CGCTCCGCCT CGACCCCTCG AACCGCTACG CGCGGCGCCG CGTGCTGCGC CTCGCGCTCG CGGCCCGCGA CTTCGCGCGG GCCCGGCACG AGGCCGACCG GCTGGTGGCC GACGGGCCGG AGGTGGCGGA GCACCACTTC CTCGCCGCCC TGGTGGCGGA CCGCGACGGC CGCCCGGCCG ACGCGCGCCG CGCCTACCGG CGGGCCATCG AGGTCGCGAA GGGCGAGTAC CCGGAGGCCT GGCTGAACCT GGGCGTGCTG GAGAAGGGCG AGGGCGACCT CGCCGCGGCC CGCGCCGCGT ACCAGCGGGC GCTGGAGCTG CGGCCCGGCT ACGGCGCCGC GCTCGTCAAC CTGGGCAAGC TGGAGGAGGC CGCCGGCGAC GCCTCGGCGG CGGAGGCCGC CTACCGGCGG GCGGTGGAGC TCGATCCGCG GCACGCGCCG GGCTGGCTCG CGCTCGGCCA GCTCCAGTCC GACGCGCGCC GCCTCGACGA GGCCGTCGCC TCGCTCCGCC GCGCGCTGGA GGCGCGCCCC GGCTACGACG CCGCCGAGCT GTCGCTGGGC GTCACCGCCG CGCGCGCCGG GCGCACCACC GAGGCCATCG CCGCCTACCG CCGCGTGCTG GCCCGCTCGC CGCGGTCGGC CACCGCCTGG TACGACCTCG GCCTGGCGCT GCTCGACGCC GGCGACCCGC GCCAGGCGGG CGACGCGTTC CGCCAGGCGG CCTCGATCGA CCCGGACCAC GTGCCGTCGC GGCGCAGGAC GGCCGAGCTG GAGCTCGCCT CCGGGCGCGT CGCCGAGGCC CGGGCCCGCT TCGAGGAGCT GCTCGATCTC GTCCCCGGCG ACGTCCCGGC GCGCGCCGCG CTCGCCGAGA TCGCCGCCCG CGAGGGCGAC CGCGCCGGCT GCGAGGCCCG CGCGCGGGCG CTGCTCGCCG AGGCGCCGAA GGATGCCGCC GTGGCCCCGC TCCTCGCGCG CTGCACCACC CTCGCCCCAC GGGCCGCCCG CTGA
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Protein sequence | MSPGDRLALD RLWPMLLGLA ALVAGALALE AWAGRRGNEP LRIAVADEAV PAGDDEEPSG DAPDGPEAPP VSEAHARART AARRALYADA IPLYEQALRD RPDAPALEAE LGAWLLAAGQ PERALPHLAR ADQLHPEPAT ALRLGLARAR LGDRDGAERD LRRALAQRPS SGAVRIALGT LLRRRGAIAE AVALLEPAAA AGSNEERARA LVALGAAHLA AGRRAEAGRA FEQAVLYAPA RVEIRLGVAR AWLGGDAGDA ERALSVLARA ADLAPDVPAV HAALGRARER TGDDAGAAEA YERALRLDPS NRYARRRVLR LALAARDFAR ARHEADRLVA DGPEVAEHHF LAALVADRDG RPADARRAYR RAIEVAKGEY PEAWLNLGVL EKGEGDLAAA RAAYQRALEL RPGYGAALVN LGKLEEAAGD ASAAEAAYRR AVELDPRHAP GWLALGQLQS DARRLDEAVA SLRRALEARP GYDAAELSLG VTAARAGRTT EAIAAYRRVL ARSPRSATAW YDLGLALLDA GDPRQAGDAF RQAASIDPDH VPSRRRTAEL ELASGRVAEA RARFEELLDL VPGDVPARAA LAEIAAREGD RAGCEARARA LLAEAPKDAA VAPLLARCTT LAPRAAR
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