| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3000 |
|---|
| Symbol | |
|---|
| ID | 7298216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 3325069 |
|---|
| End bp | 3325956 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643595810 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002493401 |
|---|
| Protein GI | 220918097 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.546475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGG AGCGGAACCC CGACCCGCGG CAGGCCGGCG CGAAGCCGCC CTACCCGAAG
CAGCAGCAGG AGACGCCCGG CAGCGAGGCG GGGATGCGCC CGCGGCCGGA CTTCGGCGAG
CAGAGCTACC GCGGGCACGG GCGGCTGCAG GATCGCGTCG CCATCGTGAC GGGCGGTGAC
AGCGGCATCG GCCGCGCCGT GGCGCTCGCG TTCGCGCGCG AGGGCGCGCA CGTGGTGATC
TCGTACCTGT CCGAGCACGA GGACGCCGAG GAGACGCGGC GCGTGGTGGA GGCGTCCGGG
CGCACCGCGG CGCTGGTCGC CGGTGATCTC TCCGAGGACG CGCAGTGCGC GCGCGTGGTG
CAGGCGGCCA TCGAGCGCTT CGGGCGGCTG GACGTGCTCG TGAACAACGC CGCGTTCCAG
GGGCGCGCCG TGCAGCGCTT CGAGGACCTC GACGCCGAGC GGGTGGCGCG CACCTTTCGC
GTCAACGTCG TCGCCATGTT CAACCTCACC CGCCACGCCC TGCCCCACCT GAAGCCCGGC
GCCTCGATCG TCAACACCAC CTCGATCCAG GCCTACCACC CCAACCCGCA GATCCTGGAC
TACGCCGCCA CCAAGGGCGC CATCCGCACG TTCACCCAGG GGCTCTCGAA GGAGCTCGCC
GCGCGGGGGA TCCGGGTGAA CGGGGTCGCG CCCGGCCCGA TCTGGACGCC GCTCATCCCG
CAGTCGTTCC CGGACGAGAA GGTGGAGAAG CACGGCGAGA GCGCGCCCAT GGAGCGCGCC
GGCCAGCCGG CCGAGGTCGC GCCGGTGTTC GTGTTCCTCG CCTCCGACGA CGCGCGGTAC
GTGAGCGGGG AGATCGTGGG GGTGACCGGG GGGTCGCCGC TGGCGTAG
|
|---|
| Protein sequence | MAKERNPDPR QAGAKPPYPK QQQETPGSEA GMRPRPDFGE QSYRGHGRLQ DRVAIVTGGD
SGIGRAVALA FAREGAHVVI SYLSEHEDAE ETRRVVEASG RTAALVAGDL SEDAQCARVV
QAAIERFGRL DVLVNNAAFQ GRAVQRFEDL DAERVARTFR VNVVAMFNLT RHALPHLKPG
ASIVNTTSIQ AYHPNPQILD YAATKGAIRT FTQGLSKELA ARGIRVNGVA PGPIWTPLIP
QSFPDEKVEK HGESAPMERA GQPAEVAPVF VFLASDDARY VSGEIVGVTG GSPLA
|
|---|
| |