| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1526 |
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| Symbol | |
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| ID | 7296935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | + |
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| Start bp | 1705425 |
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| End bp | 1707998 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 643594322 |
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| Product | ribonuclease R |
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| Protein accession | YP_002491936 |
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| Protein GI | 220916632 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.420237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGCG ACCTTCAGGA GCGCCGCCGC GCGGCGCTGG TGGACCAGTT CCGCAAGGCG
GGAGGGAAGG CCCTCTCGGT CCGCGAGGTG ATGCAGCGCG GGAACATCCA CCCCGGCGAG
CGCACCGAGG TGAAGCGCGT GCTGCGCGAC CTCGCGCGCG AGGGGGTGCT GCTCCGCGAC
GGCAACCGCT TCTCGCTGCC GGGGACGAAG CCCGCGTCGG CGGAGCGGGG CGGCCGGCGG
CCGGGGCGCC CGGGCGACGG CGCCGGGGCG GGCCGGCTCG CGCCCTCGTC GCGCGGCCGC
GGGCTGGCGG GCGCGGCCGG GCGGGCCGCG CGCAGCGGCG GCGTGCTCGG TACGCTCAAG
AAGCACCGCG ATGGCTTCGG GTTCGTGGCA CGGATCGACC GCAAGGGCGA GGACGTGTTC
GTGCCGCCGC ACGAGGCGGC GCGCGCGCTC GACGGCGACC TGGTGCGCCT GGAGATCGTC
CCGGCGCGCG GCGGGCGCAC CGCCGGGAAG ATCGTGGAGG TGGTGGAGCG CCGGCGGCGG
CTGCTGGTCG GCACCTACCA CGCGCGCGGG AAGCAGAGCT TCGTCGTCCC GGCCGACGCC
GAGCTGGAGG GTTACGTGCC GGTGGCCGAG ACGGCGGCCG CCCGCGACGG CGAGGTGGTG
AAGGTCGCGC TCGACCCGGA GAGCCCGGAG CTGCGCGGCG AGGTGGTGGA GGCGATCGGC
CGCCCGGGCG AGCCGCGCGT CGAGGTGCTG AAGGTCGCGT ACGCGCGCGG GTTCGCCGAC
GTGTTCCCGG AGGCGGTGCA GGGCGAGGCG GTCGAGACGC CGGACCACGT CCGCTCCGAG
GACTGGCGCG GCCGGCGCGA CCTCACCGCG CTGCCGCTCG TCACCATCGA CGGCGAGGAC
GCGCGCGACT TCGACGACGC GGTGCACGTG GAGCGGCTGC CCTCGCGCAA GGGCAAGCCC
ATGTACCGGC TGGTGGTGGC CATCGCCGAC GTCGCCCACT ACGTGCGGGC CGGCAGCGTG
CTGGACCAGG AGGCGTTCCG GCGCGGGACC AGCGTCTACT TCCCGATGCA GGTGCTGCCC
ATGCTGCCGG AGCGGCTCTC CAACGGGATC TGCTCGCTCA ACCCCGAGGT GGACCGGCTC
TGCATGGTCG CCGACATGGT GGTGGACGGG CGCGGCGAGA CGCACGCGAC GGAGGTGTAC
GAGGCCGTGA TGCGGAGCGC GGCCCGCTGC ACGTACACCG AGGTGGCCCG CGTGCTCGCG
GGCGAGCGGG TCCCCGGGCG CGAGCGCTTC CGCGAGTCGT TCGAGCTGAT GGCCGAGCTG
CAGGAGAAGC TCACCGCCAT GCGGCGCCGC CGCGGCAGCA TCGACTTCGA CCTGCCCGAG
GCGAAGATCG TCCTCGGCGA CGACGGCGCC GTCGCCGCCA TCGAGCGCCG GCCGCGCAAC
CGCGCGCACC GCATCGTCGA GGAGTTCATG CTGGCGGCGA ACGAGGCGGT GGCGCGCTGG
TTCGGCGCGC GCGACCTCCC CACCATCTAT CGCGTGCACG GGCTGCCCGA CGAGGAGAAG
CTCCAGGCGC TCCTCGATCT CGCGGCGGCG CACGGCTTCG AGGTGCCGGA GCTGCCCGCC
GACCCTCGCG CGCTGAACGC GCTGCTCGAG AAGTTCCACG GCCACGCCCA GCAGCGGGCG
CTGAACCAGC TCCTGCTCCG GGCCATGATG CAGGCGGTCT ACAGCCCGGA GAACATCGGC
CACTACGGCC TGGCCGCCGA GCACTACCTG CACTTCACCT CGCCCATCCG CCGCTACCCC
GACCTCGCGG TGCACCGGCT GCTCAAGGAG GAGTGGGCCC GGCGCCAGGG CCGGCCGGTG
CGCGGCACGC CGGCCGAGGC GCTGGAGGAG ATGGCGGCGC TGGCCTCGGA GCGCGAGCGC
GCGGCCATGG AGGCCGAGCG CGAGATCGCG TCGTTCTACG CGGCGCTGTT CATGGAGGAC
AAGGTCGGCG AGACCTTCGA CGGCGTGGTG GCGGCGGTGG TGGACTTCGG CGCGTTCGTC
GAGCTGAAGC GCTGGATGGT CGAGGGCCTG GTCAAGGTGG AGGACCTCCC CGGCAACTTC
GAGCTGGACG TCGTCCAGCA CGCGCTGGTG GACGCCGCCG GCGGCCGGGC GATCCGCGTC
GGCGACGAGG TGAAGATCCT GGTGGCGGCG GCGAGCCCGG TGCGGCGGCG GATCGACTTC
GTGCTGGCCG GCGCGGAGGC GATGGCGGCC GCGGCGGAGG GCGCGCGGGG GAAGCGCCGG
CGCGGTGGGC CGGGCGAGCG CGGGCCGGGC GAGGTGGCCG TGGCGAGGCC GGAGGCGGCG
GCCGCGCGCG GTCCCGCCCG CGGGCGCGGC GACCTCGCCG AGGCGCTCCA GCGGCGCGCG
GACGGCAAGG CGCCGCGGCG CGGCGAGGCG GGCGGCCGGC GCCCGGGCGC GCAGCCGCGC
GGCGGGAAGC AGCAGGCCGG CGGCCGGCGG ACGTCGGATG GCAGGCAGGG CGGCGGCAAG
CCGCGGGGCG GGAAGCCGGG CGGCGGCGCC AAGGGCCGGC GCCGCGGGCG CTGA
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| Protein sequence | MQRDLQERRR AALVDQFRKA GGKALSVREV MQRGNIHPGE RTEVKRVLRD LAREGVLLRD
GNRFSLPGTK PASAERGGRR PGRPGDGAGA GRLAPSSRGR GLAGAAGRAA RSGGVLGTLK
KHRDGFGFVA RIDRKGEDVF VPPHEAARAL DGDLVRLEIV PARGGRTAGK IVEVVERRRR
LLVGTYHARG KQSFVVPADA ELEGYVPVAE TAAARDGEVV KVALDPESPE LRGEVVEAIG
RPGEPRVEVL KVAYARGFAD VFPEAVQGEA VETPDHVRSE DWRGRRDLTA LPLVTIDGED
ARDFDDAVHV ERLPSRKGKP MYRLVVAIAD VAHYVRAGSV LDQEAFRRGT SVYFPMQVLP
MLPERLSNGI CSLNPEVDRL CMVADMVVDG RGETHATEVY EAVMRSAARC TYTEVARVLA
GERVPGRERF RESFELMAEL QEKLTAMRRR RGSIDFDLPE AKIVLGDDGA VAAIERRPRN
RAHRIVEEFM LAANEAVARW FGARDLPTIY RVHGLPDEEK LQALLDLAAA HGFEVPELPA
DPRALNALLE KFHGHAQQRA LNQLLLRAMM QAVYSPENIG HYGLAAEHYL HFTSPIRRYP
DLAVHRLLKE EWARRQGRPV RGTPAEALEE MAALASERER AAMEAEREIA SFYAALFMED
KVGETFDGVV AAVVDFGAFV ELKRWMVEGL VKVEDLPGNF ELDVVQHALV DAAGGRAIRV
GDEVKILVAA ASPVRRRIDF VLAGAEAMAA AAEGARGKRR RGGPGERGPG EVAVARPEAA
AARGPARGRG DLAEALQRRA DGKAPRRGEA GGRRPGAQPR GGKQQAGGRR TSDGRQGGGK
PRGGKPGGGA KGRRRGR
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