Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0476 |
Symbol | |
ID | 7300360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 545303 |
End bp | 545974 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 643593270 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002490899 |
Protein GI | 220915595 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.36714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGAGCT CCTCCGCCAG CCGCAGCGCG CGCAAGCCCG GGACCGATCG TCGCCGCGAG ATCGCGGACG CCGCGCTGCG CGTGATCGCC GCCCAGGGCG CCGCCCACTT CACCGCGCTC GCCATCGCGC GGGAGGTCGG CGTCTCCGAC GCGGCGCTGT TCCGCCACTT CCCCACCAAG GACGCCATCG CGGCGGCCGC CATCGACCGG ATGGAGGAGC TGCTGTTCGA GGGCTTCCCA CCCGAGGCGG CGGAGCCCCT GGCGCGGCTG GGCGCGTTCT TCCGGCAGCG CGTGGCGGTC ATCCGGGCCA ACCCGGCCAT CGCCCGCGTG TTCGCCTCGG ACGACGTCGG CCTGGTGGGC GACGGGGCCG GGGCCGCGCG CCTCGAGGCG TTCCGCCGCC GGTCCACCGC GTTCGTGCGC GGCTGCCTCG AGGAGGCGCG CCGCGCGGGC GGCCTCTCGC CGGCGGCCGG GATCGACGAG GCGCAGGTGC TGGTGCTCGG CGCGCTGCTC GCGCTCGCCC ACTCCCCCGG CGCCGCCAGC CGCCCCCCCG AGCTCGTCGA GCGCGTCTGG CGCACGCTCG AGACCTTCCT GCGCCGGCCC GACGGCCGCG CAGCCGCCGC GGAGCGCCGT CCTCCGCGGG CCCCCCGGTC ACGACGGACA GACGAAAGGT GA
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Protein sequence | MQSSSASRSA RKPGTDRRRE IADAALRVIA AQGAAHFTAL AIAREVGVSD AALFRHFPTK DAIAAAAIDR MEELLFEGFP PEAAEPLARL GAFFRQRVAV IRANPAIARV FASDDVGLVG DGAGAARLEA FRRRSTAFVR GCLEEARRAG GLSPAAGIDE AQVLVLGALL ALAHSPGAAS RPPELVERVW RTLETFLRRP DGRAAAAERR PPRAPRSRRT DER
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