Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0410 |
Symbol | truA |
ID | 7299293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 463005 |
End bp | 463742 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643593204 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_002490833 |
Protein GI | 220915529 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCGGTGG TGAAGCTCGT GCTCGAGTAC GACGGGACCG CGTACGTCGG CTGGCAGGTC CAGCCGAACG GGCCCTCCAT CCAGGCGGAG GTCGAGCGGG CGCTCGCCAC CCTGCACAAG GCGCCCCGCC GGGTCACCGC GGCGGGGCGC ACCGACGCGG GCGTCCACGC GCGCGGCCAG GTGGTGTCGT TCCCCGAGGA GCGGCCGCTG CCGGTGAAGG CCTACGTCAT GGGCATGAAC GCGCTGCTGC CGCCCGACGT GGCGGTGCGC GCGGCCAGCC TGGCGCCGGA CGGCTTCGAT GCCCGGCGCA GCGCGCGCGG CAAGCGCTAC CGCTACGTGA TCGAGAACCT GCCCACCCGC GCCCCGCTCA CCCGGCTGCA GGCCTGGCAG CACTTCCACC CGCTCGAGCT CGCGAACGTC CGGGAGGCGG CCGCCCACCT CGTCGGGCGC CACGACTTCG CCGCGTTCCA GGCCTCCGAC TGCGCCTGCG AGCACGCCGT GCGCGAGGTG CGGCGCCTGG ACGTCGTGGG CGAGGGGGGC GGGCGGATCG AGGTCGTGAT CGAGGCGACC GCGTTCGTGA AGCACATGGT GCGCAACATC GTGGGCACGC TGGTGGAGGT GGGGCGGGGC AGGCGGGCGC CCGGCTCGAT GCTCGACCTG CTCGCGCGCG GCGATCGCAC CGAGGCCGGG CCGACCGCGC CGCCGCAGGG GCTGTTCCTG GAGGAGGTCT TCTACTGA
|
Protein sequence | MPVVKLVLEY DGTAYVGWQV QPNGPSIQAE VERALATLHK APRRVTAAGR TDAGVHARGQ VVSFPEERPL PVKAYVMGMN ALLPPDVAVR AASLAPDGFD ARRSARGKRY RYVIENLPTR APLTRLQAWQ HFHPLELANV REAAAHLVGR HDFAAFQASD CACEHAVREV RRLDVVGEGG GRIEVVIEAT AFVKHMVRNI VGTLVEVGRG RRAPGSMLDL LARGDRTEAG PTAPPQGLFL EEVFY
|
| |