Gene YpsIP31758_B0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_B0025 
Symbol 
ID5384148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009705 
Strand
Start bp31244 
End bp32746 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content42% 
IMG OID640857134 
Producthypothetical protein 
Protein accessionYP_001393323 
Protein GI153930738 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTTA TATTTGGCCT AAATGCCGGA CAGCTTAATA AAAAGATTGA AGCACCTGTT 
ACTTGGGATA GTAAAACTGC TGTCAATGGT CACTGTTTGT TAGTGGGCAT GTCAGGTGCG
GGTAAGACAT ATAACTTAAG AAGCATGATC CGTCAGATGA TCGCCACTTA TGACTATCAT
CCTCATCCGT TGCGCATTCA TATCTTGGAT GTGCATGGTG ATATCGAGAT CGAAGGGGCG
AGTACCGTTA TGTTCTCAGA GCAAACCAAT TTCGGTATGA ATCCACTACG GGTTAACCCA
GATCAACACT TTGGTGGTGT CAGAAAGCGT GTACAAGGCT TTGTCAGTAC CTTAAATAAG
GTGATGCACT CTCTCGGCCC GAAGCAAGAA GCCTGCCTGC GTAATTTGTT AAATGATTTA
TATGAGAAGC ATGGTTTTAA ATACGATGAT GCCAGTACAT GGCGAATCGA AGATGATGCA
GAAACATTAA TTTCTGCTGG CCAAGACGGG CGCTTATATC TGGATATTCC GATTGAAGAG
AAAGATCAAG CTAAGGCATT GGGTGCGCGT TGGGATAGCG AAGAGAAGTG TTGGTTTATA
CTGCAAACGG ATTATGAAGG CGGTATCACA AGATGGGGAC CAAAAACAAA ATCCCGCACC
AATCCCTCAA TGAATGACCT GCTACGCTAC GCAAGAAATG TCATGCTGCA ATCTTTTATG
GGGACAGGTA TTAAAGCCGT TACAAACGTT GAAATTCTGA ATAAAGCAGC AGCGGCATAT
CAACGTAAAC TCCTTGCCGC TTTGAAACAA GGGGATCGAG CCTTTGCAGA TGAAAAGTTG
CAAAGTGAGT TAGAAAAAGC GAAAGAGAAA GCCATAGATT CGTTCACCGC TTACGCAGAC
TCCATCGTAA CAGGACGTGA ACTGGGTGAT GTAATCAAAT ATGACTCTAC TGATGTGTTA
AAGTCGGTTG TCGATAAAAT CGAAAATCTC AATGCGATTG GTATTTTTAA ATCAACGCCT
CCCCCATTTG ATAATAACAA TCCCATTTGG CGCTATAACA TTAAAGCTCT TTCGTTTTCA
GAGAGAAAAC TTTTTGCCCT CTTTAAGTTA GAAGAGATCT TTGTCAGAGC GATACAGCGT
GGAGAACAAT ATGATGTCTG TGAAATTATT GTTTTGGATG AGGCGCATAT TTACACTGAC
GATGATCCCG AAAATATCAT TAACAATATT GCCAAAGAAG CAAGAAAATT TGGTTTAGCC
ATTATCTGTG CCAGCCAATC CCCAACGCAT TTTGTGGAGG ATCTGCTCTC ATCGGTTGCC
ACAAAAGTTA TCCTCGGCAT CGATGAAAGC TTTTGGAAAG GATCAGTCTC CAAAATGGGG
ATTACAATTG ATGCACTGAA ATGGATAAAG CCTACATCAA CAATGTTGGT ACAGATCAAA
GCCAAAGGTT CAATCAAAAC CGAGTGGCAG TGGACTGTCA TCCCTAAAAA GAGAGTCATC
TGA
 
Protein sequence
MKVIFGLNAG QLNKKIEAPV TWDSKTAVNG HCLLVGMSGA GKTYNLRSMI RQMIATYDYH 
PHPLRIHILD VHGDIEIEGA STVMFSEQTN FGMNPLRVNP DQHFGGVRKR VQGFVSTLNK
VMHSLGPKQE ACLRNLLNDL YEKHGFKYDD ASTWRIEDDA ETLISAGQDG RLYLDIPIEE
KDQAKALGAR WDSEEKCWFI LQTDYEGGIT RWGPKTKSRT NPSMNDLLRY ARNVMLQSFM
GTGIKAVTNV EILNKAAAAY QRKLLAALKQ GDRAFADEKL QSELEKAKEK AIDSFTAYAD
SIVTGRELGD VIKYDSTDVL KSVVDKIENL NAIGIFKSTP PPFDNNNPIW RYNIKALSFS
ERKLFALFKL EEIFVRAIQR GEQYDVCEII VLDEAHIYTD DDPENIINNI AKEARKFGLA
IICASQSPTH FVEDLLSSVA TKVILGIDES FWKGSVSKMG ITIDALKWIK PTSTMLVQIK
AKGSIKTEWQ WTVIPKKRVI