| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0055 |
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| Symbol | |
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| ID | 5384125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | + |
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| Start bp | 13835 |
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| End bp | 14611 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640857061 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_001393250 |
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| Protein GI | 153930607 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTTT TAAACAACCG TTCTTTAGCC GCTAAAATTA TGTTCTTGGT CGCGCTATCA
GGTTCGCCAG TAACACAAAC ATCCTATGCG GGTGGTATTC CGGTAATGGA TTTGACCAAT
TTAACGCAAA ACATCATGAC TGCGATGGAA AGTGTAGCGC AGACACTCAA ACAGATTGAA
CAGTATAAAA CTCAGCTTCA GCAATACGAG AATATGCTGC AAAACACTAT GGCTCCGGCT
GCATGGATAT GGGATCAAGC CAACAACACA ATTAACGACT TAATGCGTTC TGTAGACACA
TTGAATTATT ACAAACAGCA GGTTGGCAGT ATTGATAAAT ACTTGGATCA GTATCAAGAC
GTCACTTGGT ATCGCAACTC TCCATGTTTC AAAGGTAAGA GCTGTTCACC TCAACAGATG
CAAGCAATTC GCGACACTAT CGCTGCCAGT TCTGAAGCAC AGAAACGCAG TAATGATGCA
ATGTTACGCG GCGTGGATCA GCAACAAGTA TCTCTGCAAA ACGATGCCCG ACAGTTGGTG
AACTTACAGC AACAAGCCCA AGGAGCTACA GGGCAAATGG CAGCAATGCA ATACGCCAAT
CAATTAGCCA GTTCCCAAAC TAATCAGCTT CTACAAATTC GCGGTTTACT ACTGGCACAA
CAAACAGCGA CAGCTACACG CGCCGCCGCA GTTAATGCAA AAGAATCGAT TGAAACAGCT
GGGGCCGAGA GTTTCCGAGC TGGCAGCTTA GATAAAAGCC CAGTGAAAAA ATGGTAA
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| Protein sequence | MTFLNNRSLA AKIMFLVALS GSPVTQTSYA GGIPVMDLTN LTQNIMTAME SVAQTLKQIE
QYKTQLQQYE NMLQNTMAPA AWIWDQANNT INDLMRSVDT LNYYKQQVGS IDKYLDQYQD
VTWYRNSPCF KGKSCSPQQM QAIRDTIAAS SEAQKRSNDA MLRGVDQQQV SLQNDARQLV
NLQQQAQGAT GQMAAMQYAN QLASSQTNQL LQIRGLLLAQ QTATATRAAA VNAKESIETA
GAESFRAGSL DKSPVKKW
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