Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_A0027 |
Symbol | |
ID | 5384092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009704 |
Strand | - |
Start bp | 50056 |
End bp | 50412 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640857099 |
Product | conjugal transfer relaxosome component TraJ |
Protein accession | YP_001393288 |
Protein GI | 153930576 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1.88401e-23 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGACA CCGTAGGAAA AAAAATAACA AGAAAACACG GGCGACACTT GAGAGTGCCG GTGTTACCTG ATGAGGAAAT TTTAATCAAA GCGAATGCTG CTGCTGCCGG TTTAAGCATT GCTGAATATT TAAGGCGACT TGCTTTAGGT CACACCATTT ATGGTGTTAT TGACCAGCAT CAAGTGATCG AGCTTTCAAA GATTAATGCC GATTTAGGTA GGCTTGGGGG GTTATTAAAG CTCTGGCTAA CAAATGATGA GCGCTTAGTT CGCTTGGATT CAAAAGCTAT AGAAGTTCTT TTATGCCGTA TTAGTGACAC ACAATCTGCC ATGTTTGAAG TAGTGAAAAA GCTATGA
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Protein sequence | MIDTVGKKIT RKHGRHLRVP VLPDEEILIK ANAAAAGLSI AEYLRRLALG HTIYGVIDQH QVIELSKINA DLGRLGGLLK LWLTNDERLV RLDSKAIEVL LCRISDTQSA MFEVVKKL
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