| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0001 |
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| Symbol | |
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| ID | 5384084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | + |
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| Start bp | 26005 |
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| End bp | 27261 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640857073 |
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| Product | shufflon protein, N-terminal constant region |
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| Protein accession | YP_001393262 |
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| Protein GI | 153930572 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 66 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TTAAAAAAGG GTTGGCGGCG ATATCAGGGC AAACAATCGC TTTAATTGCT
GGCCTAATTG TACTGGCAAC AATTACCGTA CCGGCAGTGA ATCTGCTTCA ACGTGACCAG
TCATACAGCG TGGCGGCGAG TCACGCTAAT CGTGTAGAGA AAGCCGTTAA TAAATATATT
CTTGAACAAT CCGCTATTGT TGGTGCGGGA TCTACAGCCA GTAGTCCTTA TACTATTGAT
GTTCCGTTGT TAATCAGTAA AGGGTATTTG CCTAGTGGCT TTGCCGCACA AAATAATTTC
TCAAGTACCT ATAAAACGCT AGTTTTCCAA CCTTCGACGC AAAAATTCCA TAGCATGACC
TTTCTTGATG GGGGAACTCA GCTAAGCATG AGCGCTGCCA GGAAGTTTGC GACACGAATT
GGTGATAGTG GTGGCGTCAT TGAAAACGGG GTTGCCAATG GCGTACAGGG CTTATGGAGC
GAAAACCTAT CAGCATTCGG GGGGTTTAAT CCAGGCGATG GCCATGTCGT GATCGCGGGG
TTCTTCTCAA ATGGCTCTGT GGTAAACGAG TATTTGTACC GTAAAGCCGT GCCTGGTCAT
CCAGAGCTTA ATACTATGAG TACAGCGCTA AATATGGGCG CAAATGATAT CAACGCCGTT
CGTGATCTCA ATGCGGCAGG TAATGCCGTG GTTCAAGGCA ATATTACAGC AGGGAACACC
GTTACGGCCA CCGGTACAGT TAAAGCCGCT ACCACGGACA CAAGCGGAGA GACGTATACC
GGCGGCTGGT TTCGAACAAG GGGTGATACA GGTTGGTACT CTGAAAAGTG GGGCGGCGGT
TGGCATATGA CCGATGGAAC TTGGCTAAGA GCGTATGGCG GTAAATCAAT CTATACCGCA
GGTATTGTGC AAGCGGCAAC GTTCCAGCCT GGGCAGGTAA GTGTTGTTAA CACAGCATGT
CCTGAAAGCG GGCGTATAAG TCGTGATGCG ACTGGAGCCA TACTGAGCTG TCAATCCGGT
GTGTGGGCCA CCAGTGGGAA AGTAGTGGTT ATCAACGGCT ATAACCCTAC ATGCCCTGCC
AATAAAATTC CCGTGGCGCG CTATTGGACA CAGGCAGGGG GAAGTAATTA CGGCGATTAT
TGCTCACTAC AAACAGGGTG GGCGGGAGTA ACAACACCGA GTTGTGAGTC GTGTGCAAAT
TGGGAAAAGT GTCATATGGT GTACTCCCAA ACTTGGTCTG CCACAGCTTG TAGCTGA
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| Protein sequence | MKKFKKGLAA ISGQTIALIA GLIVLATITV PAVNLLQRDQ SYSVAASHAN RVEKAVNKYI
LEQSAIVGAG STASSPYTID VPLLISKGYL PSGFAAQNNF SSTYKTLVFQ PSTQKFHSMT
FLDGGTQLSM SAARKFATRI GDSGGVIENG VANGVQGLWS ENLSAFGGFN PGDGHVVIAG
FFSNGSVVNE YLYRKAVPGH PELNTMSTAL NMGANDINAV RDLNAAGNAV VQGNITAGNT
VTATGTVKAA TTDTSGETYT GGWFRTRGDT GWYSEKWGGG WHMTDGTWLR AYGGKSIYTA
GIVQAATFQP GQVSVVNTAC PESGRISRDA TGAILSCQSG VWATSGKVVV INGYNPTCPA
NKIPVARYWT QAGGSNYGDY CSLQTGWAGV TTPSCESCAN WEKCHMVYSQ TWSATACS
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