Gene YpsIP31758_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2093 
Symbol 
ID5384482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2402508 
End bp2403188 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content41% 
IMG OID640865079 
Productoxidoreductase, short chain dehydrogenase/reductase family protein 
Protein accessionYP_001401066 
Protein GI153948800 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.034658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTGTA ATTTTAAAAT AATACTCACC GGTGCGTCAG GATTAATTGG TTCTGCCATT 
GCTGATGCAC TGTATAAATC AGGTATGAAT CTTGTTCTTG CTTGTAAACG TTCCCAAAAA
TTACAAGACA GATATCTTAG CGATGATAAG TCCAAAAGAG CTTATTTTTG GTATGGCGAT
CTTACCAACG AAAAAGCCTG TCGTGAATTA GTGGAGTATG CTGTTCAGCA AATGGGGGGG
GTGGATGTAT TGATCAATTG TGCCGGCGTC TTTAATTTTT CTGCTCTCGA AGAGATGACC
TATAGTAGAA TTACCGATAC CATCAGTACC AACCTTCTCG CCCCTATTTA TCTTACACAT
CTTGTATTAC CTTATATTAA GACCAGTGCC TGCCCAATAA TCGTGAATAT ATCCTCAATT
GCTGGCTTCT CCAGTTTGCC TGAAGGCGCG TGCTACGCAG CATCTAAATG GGGGCTTAAT
GGCTTTATCC ACAGCATCCG CGAAGAATTA CGCAAAAAAT CAATTCACAT CTGTAATATA
TCGCCTTGTC AGGTTAAAAC ACTGTCCCAT CATTCTGATA CGGCAATCAG AACCATAGCA
CCGGAAAATA TCGCTAATGC GGTTATTTTA GTTTTGTCAT ATGTACAAAA AACGTCGTCT
TCAATTGACG TAGTGCTGTA G
 
Protein sequence
MSCNFKIILT GASGLIGSAI ADALYKSGMN LVLACKRSQK LQDRYLSDDK SKRAYFWYGD 
LTNEKACREL VEYAVQQMGG VDVLINCAGV FNFSALEEMT YSRITDTIST NLLAPIYLTH
LVLPYIKTSA CPIIVNISSI AGFSSLPEGA CYAASKWGLN GFIHSIREEL RKKSIHICNI
SPCQVKTLSH HSDTAIRTIA PENIANAVIL VLSYVQKTSS SIDVVL