Gene YpsIP31758_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0997 
Symbol 
ID5384752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp1198467 
End bp1198907 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content52% 
IMG OID640863967 
ProductFe-S metabolism associated protein 
Protein accessionYP_001399981 
Protein GI153948590 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID[TIGR03391] cysteine desulfurase, sulfur acceptor subunit CsdE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.00392215 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCCC CACACCCATT TGGTCGTGAT ATTACGGCTA CTGACCTGAT CGAGAAATTC 
AGTGCTCACA AACAGTGGGA GGATCGCTAC CGTCAGTTAA TTCTGCTGGC CAAGCAACTC 
CCACCGTTGC AGGAGGCATG GAAAAAAAAT GAACTGGAAT TGACGGGTTG TGAAAACAGA 
GTCTGGCTCG GGCACCAACA TTTGCCAGAT GGCACTTTGC ATTTCTATGG CGACAGTGAA 
GGCCGCATAG TACGCGGGCT GCTAGCGGTG ATTCTAACCG CCGTGGAGGG TAAAACACCA 
CAACAGGTGC TGGCCGCAGA CCCCTTGTCC CTATTTGAGC AACTGGGGCT GCGCCAACAA 
CTCAGCACCT CGCGTGCTAA TGGATTACAA GCACTGGCTC AAGGTGTACA AACCATCGCG 
GCCAAATACG CAGAACGATA A
 
Protein sequence
MIAPHPFGRD ITATDLIEKF SAHKQWEDRY RQLILLAKQL PPLQEAWKKN ELELTGCENR 
VWLGHQHLPD GTLHFYGDSE GRIVRGLLAV ILTAVEGKTP QQVLAADPLS LFEQLGLRQQ 
LSTSRANGLQ ALAQGVQTIA AKYAER