| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0052 |
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| Symbol | |
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| ID | 5387702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 60215 |
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| End bp | 60433 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640863012 |
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| Product | AlpA family protein |
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| Protein accession | YP_001399053 |
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| Protein GI | 153947799 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAG AACAAGCAGC ACAAGCTACC ATTCCCCAAT CTGGGTATAT CCGGCGCTTT
CGCCTTGCAG AAATGCTAGG CGTTAGCGTT TCAACAATAG ACCGCAAAGT TAAAGATGGA
TCGCTACCAC GACCTATTAA GCTGGGCGAG AAAATCACAG CATTCAGCGC AGTAGAGATT
AATAGCTGGC TGGCAGCGCA AAGCGGGGAG GCTGCTTAA
|
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| Protein sequence | MKIEQAAQAT IPQSGYIRRF RLAEMLGVSV STIDRKVKDG SLPRPIKLGE KITAFSAVEI
NSWLAAQSGE AA
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