Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0052 |
Symbol | |
ID | 5387702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 60215 |
End bp | 60433 |
Gene Length | 219 bp |
Protein Length | 72 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863012 |
Product | AlpA family protein |
Protein accession | YP_001399053 |
Protein GI | 153947799 |
COG category | [K] Transcription |
COG ID | [COG3311] Predicted transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATAG AACAAGCAGC ACAAGCTACC ATTCCCCAAT CTGGGTATAT CCGGCGCTTT CGCCTTGCAG AAATGCTAGG CGTTAGCGTT TCAACAATAG ACCGCAAAGT TAAAGATGGA TCGCTACCAC GACCTATTAA GCTGGGCGAG AAAATCACAG CATTCAGCGC AGTAGAGATT AATAGCTGGC TGGCAGCGCA AAGCGGGGAG GCTGCTTAA
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Protein sequence | MKIEQAAQAT IPQSGYIRRF RLAEMLGVSV STIDRKVKDG SLPRPIKLGE KITAFSAVEI NSWLAAQSGE AA
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