24 homologs were found in PanDaTox collection
for query gene YpsIP31758_0052 on replicon NC_009708
Organism: Yersinia pseudotuberculosis IP 31758



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009708  YpsIP31758_0052  AlpA family protein  100 
 
 
72 aa  145  1.0000000000000001e-34  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4074  prophage CP4-57 transcriptional regulator protein, AlpA family  77.78 
 
 
67 aa  107  6e-23  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3999  phage transcriptional regulator, AlpA  60.56 
 
 
73 aa  98.2  3e-20  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4119  hypothetical protein  50.75 
 
 
84 aa  77.8  0.00000000000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0315735  n/a   
 
 
-
 
NC_010465  YPK_4164  phage transcriptional regulator, AlpA  36.11 
 
 
111 aa  53.1  0.000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2916  hypothetical protein  34.92 
 
 
71 aa  52.8  0.000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.0151072 
 
 
-
 
NC_008782  Ajs_1562  phage transcriptional regulator, AlpA  38.1 
 
 
79 aa  52  0.000003  Acidovorax sp. JS42  Bacteria  normal  0.544133  normal  0.10217 
 
 
-
 
NC_007298  Daro_2246  prophage CP4-57 regulatory  32.76 
 
 
91 aa  49.7  0.00001  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.422477 
 
 
-
 
NC_008781  Pnap_2647  phage transcriptional regulator, AlpA  37.5 
 
 
99 aa  48.9  0.00003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.561407  normal 
 
 
-
 
NC_012856  Rpic12D_3451  phage transcriptional regulator, AlpA  35 
 
 
76 aa  47.8  0.00006  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2006  prophage regulatory protein AlpA family protein  33.33 
 
 
72 aa  47  0.00008  Burkholderia thailandensis E264  Bacteria  normal  0.0927823  n/a   
 
 
-
 
NC_007298  Daro_2566  prophage CP4-57 regulatory  31.67 
 
 
91 aa  45.4  0.0003  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.37333 
 
 
-
 
NC_008789  Hhal_1156  phage transcriptional regulator, AlpA  37.04 
 
 
71 aa  43.9  0.0008  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0909  phage transcriptional regulator, AlpA  35.09 
 
 
65 aa  43.5  0.0009  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2796  phage transcriptional regulator, AlpA  32.79 
 
 
109 aa  42.4  0.002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1751  Phage transcriptional regulator, AlpA  35.85 
 
 
79 aa  42.4  0.002  Burkholderia xenovorans LB400  Bacteria  normal  0.1124  normal  0.416635 
 
 
-
 
NC_010623  Bphy_3413  phage transcriptional regulator, AlpA  36.54 
 
 
71 aa  41.6  0.003  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00533865 
 
 
-
 
NC_008340  Mlg_0638  phage transcriptional regulator, AlpA  34.38 
 
 
66 aa  42  0.003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0720576 
 
 
-
 
NC_010676  Bphyt_6511  phage transcriptional regulator, AlpA  33.96 
 
 
77 aa  41.6  0.004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0062  putative transcriptional regulator  35.48 
 
 
84 aa  41.6  0.004  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2004  transcriptional regulator  38.98 
 
 
68 aa  41.2  0.004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1062  phage transcriptional regulator, AlpA  31.25 
 
 
75 aa  40.8  0.007  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.979085  normal  0.790745 
 
 
-
 
NC_007951  Bxe_A2662  Phage transcriptional regulator, AlpA  33.96 
 
 
78 aa  40.4  0.008  Burkholderia xenovorans LB400  Bacteria  normal  0.687834  normal 
 
 
-
 
NC_011883  Ddes_1227  phage transcriptional regulator, AlpA  29.82 
 
 
78 aa  40.4  0.009  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0127458  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>