9 homologs were found in PanDaTox collection
for query gene YpAngola_B0057 on replicon NC_010157
Organism: Yersinia pestis Angola



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010157  YpAngola_B0057  type III secretion apparatus needle protein YscF  100 
 
 		 87 aa  175  2e-43  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_42310  type III export protein PscF  68.49 
 
 		 85 aa  99.4  2e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009783  VIBHAR_01703  hypothetical protein  51.25 
 
 		 82 aa  84  6e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003340  type III secretion cytoplasmic protein (YscF)  48.15 
 
 		 82 aa  80.9  0.000000000000005  Vibrio sp. Ex25  Bacteria  normal  0.786644  n/a   
 
 
-
 
NC_011149  SeAg_B2995  type III secretion apparatus needle protein  33.8 
 
 		 80 aa  44.7  0.0005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00251179  n/a   
 
 
-
 
NC_009800  EcHS_A3010  type III secretion apparatus needle protein  27.94 
 
 		 71 aa  43.9  0.0008  Escherichia coli HS  Bacteria  hitchhiker  0.00000110962  n/a   
 
 
-
 
NC_010468  EcolC_0852  type III secretion system needle protein  27.94 
 
 		 71 aa  43.9  0.0008  Escherichia coli ATCC 8739  Bacteria  normal  0.165297  normal  1 
 
 
-
 
NC_011353  ECH74115_4133  type III secretion apparatus needle protein  27.94 
 
 		 79 aa  42.7  0.002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  hitchhiker  0.00116723 
 
 
-
 
NC_010660  SbBS512_A0170  type III secretion apparatus needle protein mxiH  26.76 
 
 		 83 aa  41.2  0.005  Shigella boydii CDC 3083-94  Bacteria  normal  0.0101103  n/a   
 
 
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