| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0057 |
|---|
| Symbol | yscF |
|---|
| ID | 5798239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010157 |
|---|
| Strand | + |
|---|
| Start bp | 38665 |
|---|
| End bp | 38928 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641337868 |
|---|
| Product | type III secretion apparatus needle protein YscF |
|---|
| Protein accession | YP_001604488 |
|---|
| Protein GI | 162417739 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02105] type III secretion apparatus needle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 95 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACT TCTCTGGATT TACGAAAGGA ACCGATATCG CAGACTTAGA TGCGGTGGCT
CAAACGCTCA AGAAGCCAGC AGACGATGCA AACAAAGCGG TTAATGACTC GATAGCAGCA
TTGAAAGATA AGCCTGACAA CCCGGCGCTA CTTGCTGACT TACAACATTC AATTAATAAA
TGGTCGGTAA TTTACAATAT AAACTCAACC ATAGTTCGTA GCATGAAAGA CTTAATGCAA
GGCATCCTAC AGAAGTTCCC ATAA
|
|---|
| Protein sequence | MSNFSGFTKG TDIADLDAVA QTLKKPADDA NKAVNDSIAA LKDKPDNPAL LADLQHSINK
WSVIYNINST IVRSMKDLMQ GILQKFP
|
|---|
| |