Gene YPK_3651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3651 
Symbol 
ID6089018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4031640 
End bp4032695 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content53% 
IMG OID641598738 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001722371 
Protein GI170025866 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.163622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAT TTATTCAGAA TAATCGTGAA GGTACCGCGC TACTGGCCAT TCTCACCCTA 
TTTGCCCTAT TGGGGATTAT TGACCGCAAC TATTTCAGCT TGCAGACCTT CACCATGATT
TTCAGCAGCG CACAGATCCT GATCCTGCTG GCCATCGGGG CCACCCTGGT GATGTTGACC
CGCAATATCG ACGTTTCCGT GGGCTCCATC ACCGGTTTAT GCGCGGTGAC CGTCGGTATG
GCGCTGAATG CCGGTTTTGG CCTGGTGGCA TCTTGCTTGT TCGCCTTGTT GGTCGGCATG
GTAGCGGGCT TTTTTAACGG CATTTTAGTG ACCTGGCTGC GCATTCCGGC CATTGTCGCC
ACGCTGGGTA CGCTTGGGTT ATACCGTGGC CTAATGCTAC TGCTAACAGG CGGTAAGTGG
ATCGAAGGAT TACCGGCGGA CCTGAAAAGT TTATCAACCC CCATTCTGTT TTCTATCTCG
CCCATTGGCT GGCTAACGAT GTTGCTGATC CTTGCTATGG CCTGGCTGTT GGGCAACACC
GCCTTTGGCC GCAGTTTCTA TGCCACGGGG GATAACTTAC AAGGGGCGCG TCAGTTGGGG
GTCCGTACCG ACAGTATCCG CATTTTTGCC TTCTCAATGA ACGGCGTGAT GGCCGCACTG
GCTGGGATCG TCTTCGCTTC CCAAATTGGC TTTATCCCTA ACCAAACAGG CAACGGGCTG
GAAATGAAGG CCATTGCCGC CTGCGTGTTG GGCGGGATCA GCCTGCTTGG TGGGACGGGG
ACCATTATTG GTGCCATTTT GGGCGCTTTC CTGCTGACAC AAATCGATAG CGTACTGGTG
TTACTGCGCC TACCGGCCTG GTGGAATGAC TTTATTGCCG GTTTGGTGCT GCTGGGGGTG
TTGGTATTCG ATGGCCGTCT GCGTTGTGCT GTTGAGCGTA ATATCCGCCA ACAGAAATAT
GCCCGCTTCA CTGCCCAAGC CATTATTAGT GATAAAAAAC CAACCGTTAG CGATAACAAC
CCAGCAGCTA GCAATAAAAA GAAGGCGGCA CTATGA
 
Protein sequence
MLKFIQNNRE GTALLAILTL FALLGIIDRN YFSLQTFTMI FSSAQILILL AIGATLVMLT 
RNIDVSVGSI TGLCAVTVGM ALNAGFGLVA SCLFALLVGM VAGFFNGILV TWLRIPAIVA
TLGTLGLYRG LMLLLTGGKW IEGLPADLKS LSTPILFSIS PIGWLTMLLI LAMAWLLGNT
AFGRSFYATG DNLQGARQLG VRTDSIRIFA FSMNGVMAAL AGIVFASQIG FIPNQTGNGL
EMKAIAACVL GGISLLGGTG TIIGAILGAF LLTQIDSVLV LLRLPAWWND FIAGLVLLGV
LVFDGRLRCA VERNIRQQKY ARFTAQAIIS DKKPTVSDNN PAASNKKKAA L