Gene YPK_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0962 
Symbol 
ID6087062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1077291 
End bp1078148 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content49% 
IMG OID641596025 
Producthypothetical protein 
Protein accessionYP_001719716 
Protein GI170023211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAGTA TCGGGTGGCG TTTTTTCACT CTGGGGTGGC TGATTTTATT AGCCGGTTGT 
GCGACTGATG TTTCGTTATC AGGAAAAAAT AAGAGCACAG AAGCTAACCG AATTCAGTTT
CAACGGATGG GCTCTGCGCC AGAGTCCGGT GCGGCAGACG TCACCAGCCT GGATCTCCAG
CCCGGCGATA TTTTGTTGTC ATCATCAACT GGCATTAACT CGTTGGGTAT CCGTATATTC
AGCCTTGCCC CAGTCAGCCA TGCGGCTATT TATCTGGGAG AAGAGCAAGT GGCCGAGGCA
ACCAGTACGG GGGTGAATAT TGTTAGCCTT AACGAGGCGA TAGATCATAA CACGGCGGTT
ATTGCCTTCC GTTACCCCGG ATTAACCCCG GAACATGCCG CTAAATTGCG TGAGTTTGCA
TTAGATAAAG AGGGCTCGGA TTACAACTTC GGAGGGATCG TATTGATCGC CCCGTATATG
ATCACCAAAC GAATATGCGA ATTGCCGTTA TTTAATGCGA CCGTTCGTAA CCACTGCCTT
AGCCTGCTAG CCACAGTGCA ATTAGGTGAC GGTGGGTCAC TGACGGAAGA TCAGCGCTTC
TTCTGTTCTC AGTTTGTCTT GGAAGCCTAC AATTATGCAG GGCACCCAAT CAGCGACTCC
AATCCGGTAT GGATAACACC GGCTGATTTA CTGCATATGC GCGAAGGCGA CAGCTCTTCA
TTCCGCTCAA ATCAACCCCT ATCGTATATT GGCCATTTAA AACAGCGCAG TAGCTTATTT
ACAGGCAACA AAGGATTGGC GATGAACAAT GCAGACACAT TACTTGAGGA CAAAAGCCCC
CGTATGCTGA GCCAATAA
 
Protein sequence
MRSIGWRFFT LGWLILLAGC ATDVSLSGKN KSTEANRIQF QRMGSAPESG AADVTSLDLQ 
PGDILLSSST GINSLGIRIF SLAPVSHAAI YLGEEQVAEA TSTGVNIVSL NEAIDHNTAV
IAFRYPGLTP EHAAKLREFA LDKEGSDYNF GGIVLIAPYM ITKRICELPL FNATVRNHCL
SLLATVQLGD GGSLTEDQRF FCSQFVLEAY NYAGHPISDS NPVWITPADL LHMREGDSSS
FRSNQPLSYI GHLKQRSSLF TGNKGLAMNN ADTLLEDKSP RMLSQ