| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0744 |
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| Symbol | |
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| ID | 6090266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 817304 |
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| End bp | 819172 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641595805 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_001719498 |
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| Protein GI | 170022993 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.559917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTAT CAAATATAAC CTCGAACACA CCAATGCCGA ACATAGGGCC AGACCGTGAA
ATCCATGCTG ACCGGGCAGC AGCAACAACC TTAACTTCGG CTGACTATCA TGCAATATGG
GAAAAGTGGG AAAGCGAGGC GATACCGGGT GCTAACGAAC AGCGGGGCCA AGCAGTAGCA
AGAATGAAAG AGTGTTTGGA AAACAATGCC GATAAACTCA ATCTACATAA CCTTGATTTG
ACCTCATTGC CAGATACCCT ACCACCTTGT AACGAACTGG AGATATCGAA CAATAACATC
ACTGAGTTGC CTACTTTGCC AAACAACCTG CAAAGGTTGA TGGCAATCTG TAATCAACTG
CGTACATTAC CCGATACATT ACCTGAACAT CTATTATCTC TATATGTGAT CTCGAATAAA
CTCGAACGGC TCCCCGAGAA CCTGCCAGAG AGTCTCAATA CATTAAATGT TTGCGATAAT
CCGTCACTGC AATTCCCAAA CAACTGGCCT TCGAATCTGA TGTATCTTAA CATTGCAGAC
TGTGAATTAA CTGAACTGCC TACACTGCCG AACACCTTGA CAGAACTGTA TGCGGATTTT
AATCAACTGC GCACATTGCC CGATACATTG CCGACATCAC TATTAAAGCT AAGTGTGACC
AGTAATCAAT TCACACAACT CCCTGAGACA TTGCCCGCCT CTCTGTCATT TTTAATGGTA
TTGGGCAATA GTCTCACCGC ACTACCGGAA AATTTACCTA GTAGCTTAAG CTGTATCGGC
GCTGAATATA ATCAATTTTC CCAACTTCCC GATCTAGCAC GTCTGCCCCA AAACTGCGAA
CTTCTCTTGG AAGGTAACCC TCTTTCTGCC AGCACGCTGT TGGCACTACA GCATCTCCGT
ACTAACCCGT ATTATCAGGG GCCACAGATT ATCTGCCGCG AATTAGACGA TCTCCCCCCC
GCGAGTCTCA GTAATATTGT TGCCATCTGG TTGGTTCCCG AACAACAAAA CACGTTGGCA
GGAGATTGGG CAAATATCGA GACAGAAGCT AACTCAGCTG CTTTTAGCGT TTTTCTTCAC
CGTTTGGCTA CCACTAAAAA CACAGAAAAC ATCCCTGAAT TTAAACAACA AATTGCGGCA
TGGTTGTTGC AACTGGCTGG CTCACCGACT CTACGTGAGC AGACCTTTCT TATCGCTCAG
GAAGCAAGCG CGACCTGTGA AGACCGCATT ACCTTGACCT ATAACGATAT GCAAAAGGCA
GTCATGCTCC ATGAGGTCGA AAAGGGACAA TATGACACGC AATTACCTGA ACTGATGGCG
CGTGGCCGGG AGATGTTCCG TCTGGAACAA CTTGAGAATA TTGCCCGCGA AAAAGTAAAA
ATACTAAAAA CACTGAATGT ACATTCTGTC GACGACATCG AAGTCTATCT TGCCTATCAG
GTTAAACTAC GTGAGTCCTT AGAACTTTTC TCAGTAAGCA AAGAAATGCG CTTCTTTGGC
GTATCGCATG TGACAGAAGA CGATTTACTG AGCGCAGAAA AGAGGGTGAA AACCACGGAA
AACCACGATT TCCCGCGCTG GCTATCACAA TGGTCCCCAT GGAAAAGCGT GGTGCAACGT
ATTGAGCCTG AACGTTATGC TGCTGCGGTC AAAAGGCAAT ACAGCGCACT GGAGAATATT
TACCCAGATA AACTGGCGGC TGAGCTGGCC GCCAACGGGA TGACGGGCGA TGTGGATGCC
AACCGCATTG TCGGCAAAAG AATCAACGAT GAGATAATGG GGGAGATCGA TATGGCCCTG
ACTCATGAGG TTCTCTCTGC CAAAGGAGCC ATCTCCTTAT TAGATAGTCA GTGGATGGAA
TATATCTAA
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| Protein sequence | MNLSNITSNT PMPNIGPDRE IHADRAAATT LTSADYHAIW EKWESEAIPG ANEQRGQAVA
RMKECLENNA DKLNLHNLDL TSLPDTLPPC NELEISNNNI TELPTLPNNL QRLMAICNQL
RTLPDTLPEH LLSLYVISNK LERLPENLPE SLNTLNVCDN PSLQFPNNWP SNLMYLNIAD
CELTELPTLP NTLTELYADF NQLRTLPDTL PTSLLKLSVT SNQFTQLPET LPASLSFLMV
LGNSLTALPE NLPSSLSCIG AEYNQFSQLP DLARLPQNCE LLLEGNPLSA STLLALQHLR
TNPYYQGPQI ICRELDDLPP ASLSNIVAIW LVPEQQNTLA GDWANIETEA NSAAFSVFLH
RLATTKNTEN IPEFKQQIAA WLLQLAGSPT LREQTFLIAQ EASATCEDRI TLTYNDMQKA
VMLHEVEKGQ YDTQLPELMA RGREMFRLEQ LENIAREKVK ILKTLNVHSV DDIEVYLAYQ
VKLRESLELF SVSKEMRFFG VSHVTEDDLL SAEKRVKTTE NHDFPRWLSQ WSPWKSVVQR
IEPERYAAAV KRQYSALENI YPDKLAAELA ANGMTGDVDA NRIVGKRIND EIMGEIDMAL
THEVLSAKGA ISLLDSQWME YI
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