Gene YPK_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0568 
Symbol 
ID6087301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp626666 
End bp627367 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content52% 
IMG OID641595630 
Productvon Willebrand factor type A 
Protein accessionYP_001719324 
Protein GI170022819 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTGG TGAGCCTTCT GATTCTGACA CCTTTGTCAC TCATCTTAAG AACTACCTCT 
GATATGAGAA GGCTACCCGT TTATTTGCTG ATTGACACCT CTGGGTCAAT GCGCGGTGAA
TCCATCCATG CCGTCAATGT TGGCATTCAG GCGATGATGA GCGCACTGCG TCAAGACCCT
TACGCACTTG AAAGCGTTCA TCTCTCTATC ATTACTTACG ATAACCAAGC TCGGGAGTAT
ATCCCCTTGA CGGCACTGGA GAATTTCCAG TTCACCGATA TTACTGTCCC CAGCGCGGGA
GGCACATTCA CCGGTGCAGC ACTTGAATGC CTGATCCATT GTGTTGATCG CGATATCCAA
CGATCTGATG GCGATCAGAA AGGCGACTGG CGTCCTCTGG TGTTTCTCAT GACTGACGGC
ACCCCTTCAG ATGTCTACGC TTACGGCGAG GCAATCAAAG AGGTTAAAAA GCGGGCGTTC
GGCTCCATTA TCGCCTGTGC TGTCGGCGCG AAGGCTAAAC ATGAACACCT CAAGCAACTG
ACCTCTCAGG TCGTGGCGCT TGAAACGCTG GATTCAACCG CATTTTCAGG TTTCTTCAAG
TGGGTTTCGG CAAGCGTCGC CGCAGGAAGC TCAAGTGCGG GTATCAACAC CGGGCAGGAT
AACCTACCGC CACCGCCCCC AGAAATTCAG TTGGTACTGT AA
 
Protein sequence
MPLVSLLILT PLSLILRTTS DMRRLPVYLL IDTSGSMRGE SIHAVNVGIQ AMMSALRQDP 
YALESVHLSI ITYDNQAREY IPLTALENFQ FTDITVPSAG GTFTGAALEC LIHCVDRDIQ
RSDGDQKGDW RPLVFLMTDG TPSDVYAYGE AIKEVKKRAF GSIIACAVGA KAKHEHLKQL
TSQVVALETL DSTAFSGFFK WVSASVAAGS SSAGINTGQD NLPPPPPEIQ LVL