Gene YPK_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0567 
Symbol 
ID6088717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp625524 
End bp626564 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content51% 
IMG OID641595629 
Productvon Willebrand factor type A 
Protein accessionYP_001719323 
Protein GI170022818 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAC TGCCTATTTT CTTTGTTCTG GACTGCTCAG AATCGATGAT CGGGGAAAAT 
CTGAAGAAAA TGAACGATGG TCTGCAAATG ATCATCAATG ACCTTAAAAA GGATCCTCAC 
GCGCTTGAGA CCGCCTGGAT TTCCGTCATT GCCTTTGCCG GTGTCGCTAA AACCATCGTT 
CCTCTGGTAG AGGTTGTCTC ATTTTATCCA CCTCGACTGC CCATTGGGGG AGGAACCAGC 
CTGGGGGCGG CTCTGCAGGA GTTAACCCGC CAGATTGATA CTCAGGTCAG AAAAACCACG 
GAAGAGCGCA AAGGCGACTG GAAACCCGTG GTCTATTTGT TGACCGATGG GCGTCCAACG 
GATGATACCA CCGCCGAGAT AACGCGCTGG AAAACGCATT ACGCCCGTAA AGTGAACCTG 
ATCGCTATTG GGCTTGGCCC TTCTGCGGAT CTGAACATTC TCCGGCAACT GACAGAGAAC 
GTGCTTCTGT TCAATGATAC CCAAGAGGGC GATTTCACTC AGTTTATTAA GTGGATCACC 
GCGTCGGTCT CGGCACACAG CCGCAGCGTG GGCGAGGAAT CCCCTCCACT GTTGAATCAA 
ACCGACTACA TCGTCAAGCT AGCAAAAGAT GATGTCGCCA GAGCCTATGA TGAAAACTGC 
GTCACACTGA TTGGCCGCTG TAGCAAATCC CGTCGGCCCT ATATCATTAA ATATGAACGC 
CCAGCGGTTA ACCTTTCCTC ACTCAATTTC AAACTCAACA TTAACGGATT TAACCTTGCG 
GGGTGCCTGC CGATTGATGA GGATTATTTT GCCTGGAGTG ATGAGTCTGT GTCATCGCAG 
CAGGTGAATA CCAGCGAACT GCATGGCACA CCGGGTTGCC CACATTGCGG CAACGGCAGT 
GCATTTGCCA TGTGTAACTG CGGTAAATTG CTCTGCATCA ATGGCGCGGA TGATGTTATC 
TGCCCGTGGT GTGATAGAGG GCTGACCTTT AATGTGGATG GGGGCGGATC TGACTTCGAT 
GTTATCCGGG GGAGAGGCTA A
 
Protein sequence
MRRLPIFFVL DCSESMIGEN LKKMNDGLQM IINDLKKDPH ALETAWISVI AFAGVAKTIV 
PLVEVVSFYP PRLPIGGGTS LGAALQELTR QIDTQVRKTT EERKGDWKPV VYLLTDGRPT 
DDTTAEITRW KTHYARKVNL IAIGLGPSAD LNILRQLTEN VLLFNDTQEG DFTQFIKWIT 
ASVSAHSRSV GEESPPLLNQ TDYIVKLAKD DVARAYDENC VTLIGRCSKS RRPYIIKYER 
PAVNLSSLNF KLNINGFNLA GCLPIDEDYF AWSDESVSSQ QVNTSELHGT PGCPHCGNGS 
AFAMCNCGKL LCINGADDVI CPWCDRGLTF NVDGGGSDFD VIRGRG