Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1778 |
Symbol | |
ID | 6121016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1845576 |
End bp | 1846442 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641649749 |
Product | hypothetical protein |
Protein accession | YP_001776301 |
Protein GI | 170730868 |
COG category | [S] Function unknown |
COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.842722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATCAGTG ATTTCGATCC TAACCCTTCC GAGCATGATT CGAATCCTGA CCCTTTTGAA CATGCGAAAG GATGTGGGCA ACGTTTACGT GATGCACGGA TGGCGGTTGG GTTGACTGTT GAGGATGTCG CAACCAGCCT GCGCATGCCG ATACAGATAG TGCGTTCATT AGAGGAGGAA AACTGGCAGC GTCTAGGTGC GCCGGTATTC GTCCGTGGTC AGTTACGCGG TTATGCGCGG TTTTTGAATA TAGATCTTGA TCCATTGCTT GAACAGGCGT TCTCGACTGA AATCGAACCA GCCGAATTGG TGAGTTATGC GCATATGCAA CGCGGGAGGC ACTTGCTCGA GAGCGTCACC CGAAAGGCAA TGTATGTGGT GATCACCGGT GTGCTTGCTG TGCCGGTATG GTATGCCATG CGAAGCAGTT TTGAGCCGCG TGTGCCACGG ACTGCTTCGT TGGAGGTGGT GCCTGAGCAA TCAAAGGCCG AGGCTTTGGG GGGTACCTCG CCTGACTCGG GGGGGAGTTC CGATAGTACT GCGCCGTTTA TCGCCTCGAT TGCCCCAGTG CCGCGTAACA ACGCGATGTC TTCGGAGCAA GGGGGGAGTT TAACGCTGAG CTTCAAGGGC GATAGCTGGA TAGAGGTGGT TGCTCCCGAT GGAAGCCCAA TAGAGAAAGC ATTAATCCCT GCTGGGCAAG TACGCCATTA TGTGCTTGGC CAAGTGGGGC GTGTCGTGCT GGGTAATGCC GTTGCGGTGG AAGTTCAAGA ATCTGGCAAC ATTGTTGATC TAACGCGCTA CAGGCGCGCT AATGTGGCAC GTTTTGCGGT ATCCTCCGAT GGCTCTGTGA TGCCGGTTCC CAGATAA
|
Protein sequence | MISDFDPNPS EHDSNPDPFE HAKGCGQRLR DARMAVGLTV EDVATSLRMP IQIVRSLEEE NWQRLGAPVF VRGQLRGYAR FLNIDLDPLL EQAFSTEIEP AELVSYAHMQ RGRHLLESVT RKAMYVVITG VLAVPVWYAM RSSFEPRVPR TASLEVVPEQ SKAEALGGTS PDSGGSSDST APFIASIAPV PRNNAMSSEQ GGSLTLSFKG DSWIEVVAPD GSPIEKALIP AGQVRHYVLG QVGRVVLGNA VAVEVQESGN IVDLTRYRRA NVARFAVSSD GSVMPVPR
|
| |